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Information for unigene UN10409

FASTA Sequence
Unigene ID: UN10409Length: 1246 SSR 
GTAAATAGTCTTTTAGAGATTACTCTTTATGCTGTTTTTTCTGTTACATGTTGCTTGTTTAAAATGGGTTCCTGGCCGACTTGAGC
AAAAGAAGTAATAGACATCAACCGTTACATGTTCGTATCTTTTGCTATAAAGATCATTAAGATGGATTAATACATAAACGTTGAGA
TTCAATTCGATTGCAAGGGAAGAAGGACGATGCAGTACAAAGAATCTGTACAATAAATATATATATCTTTAGTGTGGTAACTTGTA
TAGTTTGCTCCACTCTTCTTCGGTTCATGCTTGGAGCTTGGTGCTCAGACCAGGACAACGATGATGACAATGAGTATAACAATCCC
AAATATGAGTATAAGAAGGCATGTCAAGGATGAGTTTGCTCTTTGAGTTTTAGATGCTTTTCTGAGTTGGGAAGTGGCTTGTGCAG
TTGCAGCATGTGAATTATCAATGTTGGAGCTGATGTCATCGATCATAACTCCTTGATCGTTGACTAAAACAGCTAGATCTTTGAAG
ATTTCATTCACTTCACCAATCTGTTCTTGAATTTCTCTGATTCCTTGCTCTCTTTCCTCAATAATTGCTTCATTGAATGTTATCTC
GTTATCTAGAAACACCACTTCTTGCCTTTTTGATTGTAGAAGAAGAGTTTGCTCCTGGGAGGTCCTTAAAGATTCAATATCCAGTT
CCTGTGCATTATAACTGGTAGGCATATCTTTAGTGACGACAGGAGTGTATGTTATTTCTCTTTCAGCTGCAAGTCTCTGAGCTTTC
TGAAACTCTTTGAGAACTGATTGGAAATCTTTCGCCAGTTTAGCATCCGCAATCTTCTTAATTGGAGTAGTTGCTCCATGGAGGTC
GGCTTCGCTAGCTTCTTTAAGCTTAGCAGACGTATTTTTCACCAGTTCTGATATCTGTAACCTTGTCTTTTGCAGCTTATCTCGCA
AATCGAGAGTATCCTTAGGCGTTCCGATCGAATTAACGAGGCGGAAGAAGGAATTGACGGCCGTGCTGATCCTGAAGATCCCGGCG
GCTACCTCCTGAGACGGATCTCCACGAGACAGAGGTTTCTGCTGCTGCCTCCTCCCGCCGGTGAAACGATTCGGCGATTGGAATCG
AGAGCCAGCTTCGAGATCTTGGAAACTCATCCTGCTCTTCTTCTTCTTCTTCTTCTTCTCTCGAATCTAATCTCTCTAGCAATGGG
GGAACGATGATTGGCAAGAGTTAGGTAAATACGTTTTCCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABB83612 syntaxin-like protein [Brassica oleracea]12532e-135
XP_002873796 hypothetical protein ARALYDRAFT_488543 [Arabidopsis lyrata subsp. lyrata]12182e-131
NP_197185 syntaxin-21 [Arabidopsis thaliana]11752e-126
AAM66128 syntaxin homologue [Arabidopsis thaliana]11707e-126
XP_002274100 PREDICTED: hypothetical protein [Vitis vinifera]8921e-093

Swiss-Prot top hits (Blast detail)Scoree value
Q39233 Syntaxin-2111758e-128
P93654 Syntaxin-228219e-087
O04378 Syntaxin-237205e-075
Q9C615 Putative syntaxin-244794e-047
O15400 Syntaxin-73281e-029

TrEMBL top hits (Blast detail)Scoree value
A6M8U5 Syntaxin-like protein12531e-135
Q1WW70 At5g1683011751e-126
C6TA84 Putative uncharacterized protein8873e-093
Q8LJR4 Syntaxin8873e-093
A5BYQ4 Putative uncharacterized protein8694e-091

Arabidopsis top hits (Blast detail)Scoree value
AT5G16830.1 SYP21 (SYNTAXIN OF PLANTS 21); SNAP receptor11855e-130
AT5G46860.1 VAM3; SNAP receptor8218e-088
AT4G17730.2 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor7222e-076
AT4G17730.1 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor7204e-076
AT1G32270.1 ATSYP24; SNAP receptor/ protein binding4794e-048

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  45%
 
62  18%
 
122  18%
 
101  9%
 
111  9%

Unigene MembersMember information