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Information for unigene UN10415
| FASTA Sequence |
| Unigene ID: UN10415 | Length: 1104 |
SSR | | GGGTCGTCGTATTAAATTAAATCCCCGTCGAGATTAAAATCCTGGATCGCCGTCGCCGCCGCTGCTGATCAATTAGTAGATCGATA
CAGAGAGAGAGAGGGAGCGGGGGGCGGGGAAGAAGATTCCGACATTATTTGGTTGAGCGGATCCGGGAGAGAGACAGAACAGAAAC
ATAAAAGATAAAAGATGGCTATGTCACAGATAGTGAACACGTACCCGCTGTCGAACTACAGCTTCGGTACTAAAGAACCGAAGCTG
GAAAAGGACACCTCCGTCGCCGACCGACTCGCTCGTATGAAAATCAACTATATGAAAGAGGGCATGAGGACTAGCGTTGACGCCAT
TCTGCTGGTACAAGAACACAACCATCCTCACATACTTCTCCTGCAAATTGGTAACACCTTCTGCAAACTTCCAGGTGGACGCCTCA
AGCCTGGAGAAAATGAAGTTGAAGGCTTGAAAAGAAAGCTGACCAGTAAGCTTGGAGGCAATTCCGCTGGTCTTGTACCTGACTGG
AAGGTAGGAGAATGTGTTGCGACATGGTGGCGTCCAAACTTTGAAACCATGATGTACCCTTACTGCCCTCCTCACATCACGAAACC
AAAGGAATGCAAGAGACTCTTCGTTGTCCACTTGTCTGAGAAAGAGTACTTTGCAGTGCCCAAAAACTTGAAGCTCTTGGCCGTCC
CTTTGTTTGAACTCTATGACAATGTTCAGAGATATGGACCAGTTATATCGACCATTCCTCAACAGCTATCCAGATTCCATTTCAAC
ATGATTAGTTCGTGATTCTACTTTACTTGGTGTTCAAGAACAAGAAACATGTTTGGTGGTACGTTACTAAGGCAGGTTTCAGAGAT
GATGCGTTTGGGTTTTTTACATTATAGACTTGATCTGTTTATGAAGAACCCGGTTCATTCAAGTTTTTCAGCACAAACAGATTATT
GGATCTCGTTTCTATCGAAAAGCATTCGTTATCATATGACTAACGGTGGTCTTGTCTAACCGTGGAACATGTATTCACTCATTGTT
AAATGATATTTCCCTTCTGGTATCTATGACAGAAACAAGGCCATGTTAAAAGAAACTTTTTTTATTGGATCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002869668 hypothetical protein ARALYDRAFT_492272 [Arabidopsis lyrata subsp. lyrata] | 1050 | 5e-112 |
| NP_194285 cleavage/polyadenylation specificity factor [Arabidopsis thaliana] | 1037 | 2e-110 |
| XP_002321911 predicted protein [Populus trichocarpa] | 981 | 5e-104 |
| XP_002510802 pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus communis] | 981 | 5e-104 |
| ACU14061 unknown [Glycine max] | 971 | 7e-103 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q3ZCA2 Cleavage and polyadenylation specificity factor subunit 5 | 637 | 2e-065 |
| O43809 Cleavage and polyadenylation specificity factor subunit 5 | 637 | 2e-065 |
| Q9CQF3 Cleavage and polyadenylation specificity factor subunit 5 | 637 | 2e-065 |
| Q5RAI8 Cleavage and polyadenylation specificity factor subunit 5 | 637 | 2e-065 |
| Q4KM65 Cleavage and polyadenylation specificity factor subunit 5 | 637 | 2e-065 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GXS3 Putative uncharacterized protein At4g25550 | 1037 | 1e-110 |
| A9PGR8 Predicted protein | 981 | 3e-104 |
| B9R9C7 Pre-mRNA cleavage factor im, 25kD subunit, putative | 981 | 3e-104 |
| C6SXT8 Putative uncharacterized protein | 971 | 5e-103 |
| A5B6Q5 Putative uncharacterized protein | 952 | 8e-101 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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