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Information for unigene UN10422

FASTA Sequence
Unigene ID: UN10422Length: 854  SNP
GACAGAAAAAAGTAATTGCTGACTTGTCTTTAATAGATAATAAATCTCACAAAGGAAGGAAAACCATAACAAAACATCAAACAGCT
TACATCTCAGATGTATTTGTCAAACAGAGTTTATTCATAATACTTCCTAGACTTAACCCTTCAGAGATTATACCATAGGTTGCACG
TAGTCTTCTCTTACACATCTCCTGTTTGTACCATCATATACACGTCATGGTATAAAAACATCAGCAGAGGAAAATCAAGCCTGCGC
GGTTTCTCCAGCTGCTGCTACTGCTGCAGCACCGTTTGTTTTCACTCGCTTCTCCTTGTAGTCTTTCACAGCTGCCTTGATGGCGT
CCTCGGCTAGCATACTGCAATGGAGCTTCACTGGTGGGAGAGAAAGATGCTTGGCGATTTCGGTGTTCTTGATGGTCAGAACTTCC
TCCATAGCTTTGCCTTTCACCCATTCAGTGGCGACAGACGAAGACGCGATAGCGGAGCCACAGCCAAAGGTCTTGAAACGAGCATC
GACGATCTGACCGGTCTTCTCATCGACCTTGATCTGCAGCTTCATCACATCACCGCACGCGGGAGCTCCGACGAGACCCGTGCCGA
TGCTGGGATCGTTCTTGTCGAAAGACCCGACGTTGCGGGGGTTATCGTAGTGGTCGATGACGTTCTCGTGGTAGGATCGGAAGATA
CCGACGGACCACGGGGTCGATTGGCGCGACGTAAGGCCTAGAGCGTTCTTCGCGGCTTGCCTGAGCATCATCGTCGTCGATTAGGG
TTTGAGAGAGAGACGGGTTGTTTCCGTGGATGTTGGAGAGATGAGATTGGAAGTTTAGGAGGGGTCCTTTTCTTTATTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867782 iron-sulfur cluster assembly complex protein [Arabidopsis lyrata subsp. lyrata]8112e-084
NP_193953 SufE/NifU family protein [Arabidopsis thaliana]8058e-084
AAM66114 nifU-like protein [Arabidopsis thaliana]8003e-083
XP_002511390 nitrogen fixation protein nifu, putative [Ricinus communis]6491e-065
ACI47519 iron-sulfer cluster scaffold protein ISU1 [Eucalyptus grandis]6354e-064

Swiss-Prot top hits (Blast detail)Scoree value
Q9H1K1 Iron-sulfur cluster assembly enzyme ISCU, mitochondrial5322e-053
Q9D7P6 Iron-sulfur cluster assembly enzyme ISCU, mitochondrial5285e-053
Q6BGU0 Iron sulfur cluster assembly protein 1, mitochondrial5009e-050
Q6CRQ9 Iron sulfur cluster assembly protein 1, mitochondrial5009e-050
Q6FJY3 Iron sulfur cluster assembly protein 1, mitochondrial4944e-049

TrEMBL top hits (Blast detail)Scoree value
O49627 AT4g22220/T10I14_508056e-084
Q8L984 NifU-like protein8002e-083
B9RB15 Nitrogen fixation protein nifu, putative6497e-066
B8R1J5 Iron-sulfer cluster scaffold protein ISU16353e-064
C6T2J7 Putative uncharacterized protein6292e-063

Arabidopsis top hits (Blast detail)Scoree value
AT4G22220.1 ISU1; structural molecule8053e-086
AT4G04080.1 ISU3 (ISCU-LIKE 3); structural molecule6226e-065
AT3G01020.1 ISU2 (ISCU-LIKE 2); structural molecule5966e-062

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
87  44%
 
112  13%
 
62  13%
 
94  25%
 
121  6%

Unigene MembersMember information