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Information for unigene UN10442
| FASTA Sequence |
| Unigene ID: UN10442 | Length: 866 |
SSR | | GGGCGATCACAGGTGCAAAGTCTCTCTCTCTCTGTATATCTGAAGCTTTTCCGATGGCAGATTATCATTTCGTCTACAAGGACGTT
GAAGGAACGTCGACGCAATGGGACGATATCCAACGGAAGCTAGGGAATCTCCCGGAGAAGGCTCCGGCGTTCAAACCGCCGGCTTA
TACTCCGGCACAAGACGAGGCTTCAGCTCCAAAGGACAAAGCTTGGTTCGATGGGAAAACAGAGGAGGAGCTTGAGGATCTCGAGG
ACGACAAAGATCTCGACGACGATCGCTTCCTCGAAGAATACAGGAAGAAGAGGTTGACTGAGCTGAGAGAAGCTGCTAAAGTTAGG
AGGTATGGATCGGTGACTCCCATCTCTAGCTCTGATTTCGTGAGGGAGGTTACGCAAGCTTCTGCTGAAGTTTGGGTTGTTGTGTG
TCTCTACAAAGATGGTTTTGCAGAGTGTGGATTGTTATTGGGTTGTCTAGAGGAACTGGCTGGTAGATACCCGGGAACGAAGTTTG
TTAAGATTGTATCAACTGATTGTATTCCCAACTACCCTGATTGCAATCTCCCTACCTTGCTTGTGTACCATCATGGTGCTGTTAAA
GGAACTCATGTTGGCTTGAAGAGCGTTGGCCGTAGGTGCACCCCTGAGAGTGTAGCCTTAGTTTTGTGTCAGTCAGAGCCAGTTCT
TAACGATGGCAAAAGTGGAGACGATGACTCCTCAAGGGAAGCTGTGATGGCTGGCGTTCGAAGACAGTCATAGAACGAGTGGTCGA
AGACATGAAGACAGGATATGATGATGATGGTACATAGCGATAAGTCTCTAAAGCTCTCTGTTTTCTCTGTTGGTTTGTTTGTGCCT
TGTGAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873657 hypothetical protein ARALYDRAFT_488258 [Arabidopsis lyrata subsp. lyrata] | 1166 | 1e-125 |
| AAM65214 unknown [Arabidopsis thaliana] | 1152 | 5e-124 |
| NP_196928 thioredoxin family protein [Arabidopsis thaliana] | 1152 | 5e-124 |
| XP_002509555 Phosducin, putative [Ricinus communis] | 961 | 7e-102 |
| XP_002298605 predicted protein [Populus trichocarpa] | 952 | 8e-101 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9H2J4 Phosducin-like protein 3 | 358 | 3e-033 |
| Q5RB77 Phosducin-like protein 3 | 354 | 8e-033 |
| Q4KLJ8 Phosducin-like protein 3 | 340 | 3e-031 |
| Q8MR62 Viral IAP-associated factor homolog | 336 | 9e-031 |
| Q8BVF2 Phosducin-like protein 3 | 335 | 1e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LAQ4 Putative uncharacterized protein | 1152 | 3e-124 |
| Q9LYA5 Putative uncharacterized protein At5g14240 | 1152 | 3e-124 |
| B9RBM1 Phosducin, putative | 961 | 5e-102 |
| B9GJD0 Predicted protein | 952 | 5e-101 |
| C6TL22 Putative uncharacterized protein | 867 | 4e-091 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G14240.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Phosducin (InterPro:IPR001200), Thioredoxin-like fold (InterPro:IPR012336); Has 750 Blast hits to 750 proteins in 282 species: Archae - 0; Bacteria - 2; Metazoa - 486; Fungi - 126; Plants - 51; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). | 1152 | 2e-126 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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