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Information for unigene UN10449
| FASTA Sequence |
| Unigene ID: UN10449 | Length: 881 |
SSR | | GGGTCTCTCCTCTCTCTCTCTCTCACTCGATCGGCAATGGCTGCCCCCAACTCCATTTTCACCGCCGCTCCGTCTCGAAACCTTGT
ACCTATATCTCTTCACCAGTCATCATTGTCTTCAGCGTTGAGTCCCCGGGTCGCCAGATCGAACTCCGTCGCGTTTCGTCCCAAAC
CCCGATCCAGCTCGCTCGTCTTCTGCTCCACCGATGATTCAAAAGTCTCGTCCGCAGAGAAAGAGATCCCAATTGAACTCAGGTAC
GAGGCTTATCCGACAGTGATGGACATTAACCAGATACGAGACATTTTGCCTCACAGGTTCCCGTTTCTGTTAGTGGATAGAGTGAT
AGAGTACACAGCTGGCGAATCTGCGGTAGCTATAAAGAACGTGACCATTAATGACAATTTCTTTCCTGGCCATTTCCCTGAGAGGC
CCATTATGCCTGGTGTCCTCATGGTTGAGGCGATGGCTCAGGTGGGAGGTATAGTGATGCTGAATCCAGAAGTGGGGGGATCTAAA
ACCAACTTCTTCTTTGCTGGAGTCGACAAAGTCAGGTTCAGGAAGCCTGTGATTGCTGGTGACACTCTGGTGATGAGGATGACGCT
TGTGAAGCTGCAGAAGCGGTTTGGGATAGCCAAAATGGAAAGGGAAAGCATACGTAGGGAACACTCTGGTGTGCGAAGGAGAGTTC
TTGATGGCTATGGGAAAAGAAGAGGAGTGATCATCTTCTCGTTGCCTTTTGCTTTTTTTTTTTTCTCCTTACCCCTTGTGGGTACG
AGTTATTTATCACACATTCGAGTCTTATATCTATCTCCAGTTTCTGTTGTTTTGTTACGAATGCTGTTTGACCATTTTAAAAGATA
ATAATGAATTGGAATTATCAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAZ66933 117M18_14 [Brassica rapa] | 924 | 1e-097 |
| NP_196578 3R-hydroxymyristoyl ACP dehydrase [Arabidopsis thaliana] | 831 | 9e-087 |
| AAK60545 putative 3-keto-acyl-ACP dehydratase [Brassica napus] | 831 | 9e-087 |
| XP_002871407 hypothetical protein ARALYDRAFT_487843 [Arabidopsis lyrata subsp. lyrata] | 831 | 9e-087 |
| ACQ44222 putative beta-hydroxyacyl-ACP dehydratase [Arabis alpina] | 801 | 3e-083 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8KBX0 Bifunctional enzyme lpxC/fabZ | 357 | 4e-033 |
| Q2JTA0 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase | 354 | 8e-033 |
| Q2JI59 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase | 352 | 1e-032 |
| Q3A902 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase | 344 | 1e-031 |
| P61453 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase | 341 | 3e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q4AC06 117M18_14 | 924 | 1e-097 |
| Q94F93 Putative 3-keto-acyl-ACP dehydratase | 831 | 6e-087 |
| Q9LX13 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase-like protein | 831 | 6e-087 |
| C3UJT3 Putative beta-hydroxyacyl-ACP dehydratase | 801 | 2e-083 |
| Q9SIE3 At2g22230/T26C19.11 | 683 | 9e-070 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G10160.1 beta-hydroxyacyl-ACP dehydratase, putative | 848 | 4e-091 |
| AT2G22230.1 beta-hydroxyacyl-ACP dehydratase, putative | 683 | 5e-072 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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