 |
Information for unigene UN10453
| FASTA Sequence |
| Unigene ID: UN10453 | Length: 1032 |
SSR | | GGAATTTTCGATTTATAGAGAATAGTTATAAATTAAGACGAAACTTTATTTTTTTCCTTCTAATAAAAAGACAAAAACGTTACGGA
CTGGTTGGCTCTCTAACCAGTCACCGATTATCTCTCTCTCTCTCTCTCTCTATCTCTCTACTCTCTCTCCTTTAATCATGGTGGTT
GAACTATGGGAGACGGTCAAGGAAACAATCACAGCTTACACCGGACTCTCTCCGGCTGCCTTTTTCACCGTCTTGGCTCTCGCTTT
CGCCGTCTACCAAGTCGTCTCCGGTTTCTTCGTCTCCCCCGAGGAACACCGTCCTCGTTCAACGGAGGATTACCCTCAGCCTGAGC
CCCTTCCGCCTCCGGTTCAGCTCGGAGAAATCACGGAGGAGGAGCTCAAGCAGTACGATGGCTCCGATCCCAAAAACCCCCTTCTT
ATGGCCATCAAAGGCCAGATCTACGATGTTTCCCAGAGCAGGATGTTCTATGGACCAGGTGGACCATACGCTCTGTTTGCGGGGAA
AGATGCGAGCCGAGCTCTTGCTAAGATGTCCTTTGAGGAATCCGATTTGACCGGAGACATCTCGGGACTAGGTCCATTTGAGCTAG
ATGCGTTACAAGACTGGGAGTACAAGTTCATGAGCAAGTATGTCAAAGTCGGGACCATTCAGAAGAGTGATGGAGAAGGCAAAGAA
AGTACCACAGACTCGGAACCTGCTACAAACACCGGGGAAGAAGCTCCCGCGGTTACCCACGGTGAGACTTCTGCAAGCATAGAAGA
GAAAACGGAAGAAACCACGGAGAAGAAGGATGTTGCAAATGGTGATGCTGCAAAGGAGGACTAAAGGCAATGAAGCAGCGCTTTCT
CGGTGAAGATTTTTTTCAGGGTTTTATGAGAGTCGTACTCGTATATATAGCTTTAAGTTGGAAGAACCAAACTCAATCAAATAAAA
AAAAATGTGTAAGACTTTTTATCTTTGTGGATCTTATGACATCTAAATCTCTTTATGAAAAAGCTTCAACTACATTATTCTGCGGT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_190458 membrane steroid-binding protein 2 [Arabidopsis thaliana] | 858 | 8e-090 |
| AAD34615 putative progesterone-binding protein homolog [Arabidopsis thaliana] | 847 | 2e-088 |
| XP_002875931 membrane-associated progesterone binding protein 3 [Arabidopsis lyrata subsp. lyrata] | 837 | 2e-087 |
| XP_002510808 steroid binding protein, putative [Ricinus communis] | 745 | 1e-076 |
| NP_001150181 membrane steroid-binding protein 1 [Zea mays] | 739 | 5e-076 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M2Z4 Membrane steroid-binding protein 2 | 858 | 4e-091 |
| Q9XFM6 Membrane steroid-binding protein 1 | 697 | 2e-072 |
| Q9SK39 Probable steroid-binding protein 3 | 268 | 9e-023 |
| O55022 Membrane-associated progesterone receptor component 1 | 254 | 4e-021 |
| P70580 Membrane-associated progesterone receptor component 1 | 253 | 5e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9R9D3 Steroid binding protein, putative | 745 | 7e-077 |
| B6TM12 Membrane steroid-binding protein 1 | 739 | 4e-076 |
| A3C684 Putative uncharacterized protein | 734 | 1e-075 |
| Q9FVZ7 Membrane steroid binding protein 1, putative, expressed | 729 | 5e-075 |
| A2Z932 Putative uncharacterized protein | 725 | 2e-074 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G48890.1 ATMP2; heme binding | 858 | 3e-092 |
| AT5G52240.1 MSBP1 (membrane steroid binding protein 1); steroid binding | 697 | 2e-073 |
| AT2G24940.1 AtMAPR2 (Arabidopsis thaliana membrane-associated progesterone binding protein 2); heme binding | 268 | 8e-024 |
| AT4G14965.1 AtMAPR4 (Arabidopsis thaliana membrane-associated progesterone binding protein 4); heme binding | 187 | 2e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
