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Information for unigene UN10455
| FASTA Sequence |
| Unigene ID: UN10455 | Length: 1663 |
SSR | | GGGAGAGATTTGTCTCCCTCTGTTTAGAAAATGGAGAGGTACGGTCGCGCCGGCTAAGAAGGGTCGCGATCGGATCCGTCGATTCA
GTGGACCTCCCATGGAGTTGAAGCTTCGATGGGGCGGTTAGGGTTGAGCGGTGGCGTTGGAGCTGGAGGAGAATCGTATCCGGAGC
GATCCGATGAGCCTGATTGTATTTATTACTTGTGAACCGGTGTCTGCGGGTACGGGTCAAGATGTCGGTTTAATCACCCACGAGAT
CGTGGAGCTGGTATTGGAGGTGCGAGAGTAGGAGGAGGAGATGGAGCTTTACCGGAGAGGATGGGACATCCTGTTTGCCAGCATTT
TATGAGAACGGGGACATGTCAGTTCGGTGCTTCTTGCAAGTACCATCATCCTAGACAAGGAGGTGGTTCTATTGCGCCTGTCTCTT
TAAGTTATTTGGGATATCCATTACGCCCGGGAGAGAAAGAGTGCTCTTATTACATGAGAACCGGTCAGTGTAAATTTGGTTTGACC
TGTAGATTCAACCATCCAGTTCCATTGGGGGTACATGGACAACAACCTCAGCAGCAGCAGCAGCAGCCACAGCCGCAGATGCATTC
TGTATATCCAACACTTCAATCTCAATCCATGCCTTCATCTCCTCAACAATATGGTTTAGTTTTGTCAAGACCTTCTCTTTTACCTG
GTTCGTATCTTCCAAGTCATTACGGTTCTCCTCCTCCTCCGATGGTTATGCCTCCGGGAATGGTTACATACCCTAGTTGGAATCCA
TACCAGGCTTCTATAACTGCAATGCCTTCTCCTGGAACACAACCCTCTATTGGATCAAGCTCTGTTTATGGAATGGCGTCTTTATC
TCCTCCAGGGACTGCTTATACAAGAGCATACCAATCTGGTGGGCCTTCTTCCTTGACTACCTCAACAGAACAACAGTCTTTTCCTC
AGCGACCTGATCAACCTGAGTGTCAATACTTCATGAGAACCGGAAACTGTAAGTTCGGATCTTCGTGTAGATACCATCATCCTCTA
GACGCAGCTCAACCTAAAACTGGTGTTGTCCTCAGCTCCAGTGGCCTTCCACTTCTTCCCGGCGTAGCGCAATGCACTCACTTTGC
GCAACACGGAATTTGCAAGTTTGGACCGGCGTGTAAGTTTGATCACTCGATGAGTTCTTCACTTAGCTACAGCCCGTCTGCTTCTT
CTCTAACCGAGATACCTGTTGCTCCATACCCAATCGGATCATCCTCACTCAGCGGCGCATCAGCTCAAGTAAGTTCGAGCAATGAA
CCCACCACAGAGGCTGTGACTGCTGTAGTTTCTCCTCCAATAGTCGTCAGTGGCTTGAGCCTTGAAAAGCCAGCTGACACTAGTGT
TGACTCTTCTAGCGTCAATAGCAGCATAGAAGCTAAGACTTCTTCAAATTAAAACAAAAGAGAGAAGAAAACATACTCTGATTCTT
CGTGAACTTAAACAACATTAAGAAAAGAGAAGATTATTTTTGGGGTCTGAGATTTGATGGAAGCAGAGAGAAACCAAAACCAAAGC
TTCTGTCATTTACCATTTGTCCATATATAAATAGATTCTCTCTCATACGGCCATCTCTCTTGTTTTTTTCTTTCTTGAACAACGAT
TACTACTAATAAATGGCCTTATTCACGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187292 zinc finger CCCH domain-containing protein 34 [Arabidopsis thaliana] | 1932 | 5e-214 |
| ADK63414 CCCH type zinc finger protein [Brassica rapa] | 1929 | 1e-213 |
| BAF02113 hypothetical protein [Arabidopsis thaliana] | 1927 | 2e-213 |
| AAF08587 hypothetical protein [Arabidopsis thaliana] | 1825 | 1e-201 |
| CAN78551 hypothetical protein VITISV_003243 [Vitis vinifera] | 1318 | 7e-143 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SQU4 Zinc finger CCCH domain-containing protein 34 | 1932 | 2e-215 |
| Q6NPN3 Zinc finger CCCH domain-containing protein 58 | 1519 | 2e-167 |
| Q84W91 Zinc finger CCCH domain-containing protein 32 | 1014 | 6e-109 |
| Q2R4J4 Zinc finger CCCH domain-containing protein 63 | 823 | 8e-087 |
| Q2QT65 Zinc finger CCCH domain-containing protein 66 | 776 | 2e-081 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5B1K6 Putative uncharacterized protein | 1318 | 5e-143 |
| B9RT23 Nucleic acid binding protein, putative | 1296 | 2e-140 |
| B9HSD6 Predicted protein | 1285 | 3e-139 |
| B9N500 Predicted protein | 1260 | 3e-136 |
| B9S3U9 Nucleic acid binding protein, putative | 1077 | 4e-115 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G06410.1 nucleic acid binding / zinc ion binding | 1936 | 6e-217 |
| AT5G18550.1 nucleic acid binding / zinc ion binding | 1527 | 2e-169 |
| AT2G47850.1 zinc finger (CCCH-type) family protein | 1014 | 5e-110 |
| AT2G47850.3 zinc finger (CCCH-type) family protein | 1014 | 5e-110 |
| AT3G02830.1 ZFN1 (ZINC FINGER PROTEIN 1); DNA binding / nuclease/ nucleic acid binding | 746 | 6e-079 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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