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Information for unigene UN10485

FASTA Sequence
Unigene ID: UN10485Length: 1130 SSR 
CTAACACTCTTGGCAATATTGGTTAATCTATGTTCTAATTACACACTTGGAATTAGAACTGTGTAACAAGTTCAACAGAACAATGA
TCACACTCGTCTCTCTTCTTGGTAAAGAAAACTACAGACTGAATGAATGAATGAATGAATGTTTTGAATCTCATCTACCATTATTG
TCATCAGACCACATCATCTAACTCCAACTTAAAACCAAGCAAAGCTAACAAAAAATACTAGCAAGAGAACAACTTCAAAGCTAAAA
CGTGCCTTACAAGCAGAAGAGGTCTTCCCAGCCTTATCAGCAGCTTCAATCTTCTCATTGTCAGCGCTTGGAGTAGGTGCAGGAGA
ATCAACTTCAGGTGTCTCTGCTTCAGGTGTCTCTGCTTCAGGTGTAAGTTTTGGATCATTACTATCTGAGACATTGTCTTCATCCC
CTGGTCCAGGAGCTGGAGCTGAAGGGGTTGCACCACTGATGGGAGATGGACCTGGAGCCATTGCAGCATGCATAGGAGATGGAGCC
GGAGACGGAGCTGGAGCTGGAGCCAAAGGAACGGGTGGTGGTGGAGGTGGGAGAACTGCTAAGCTGAGTCCAGGAGCCACAATGGG
CATGCTAATCTGGATTATAGACAGGTTAAAAGGGTTGTGATACAACGTGGTAACATACTCAGCGTTTAGAGGCGAGCCCTTTACTC
CGGATCCAAAGTAAACTCTTCCTTTAGATTTGGTACAGTTGAGGAAACCGTTCATCTCTTCACCCAAACCGGTTGTTTGGTACAAG
GTAGTGAGCATCATGCTCGTCTCCTTCATCCCCTTGAGCTTGAGCTCGTCGTAGTAGTCAAGAATGACATGAGTCATGAGGATGTT
CTTGAGCTCAATGGCGGATTTGTTAGTGATAGAACCGATGGCGCTGTTGTTAACAGCGAGTAGGGTTATGGTTTGGTATTTGCTTA
TGAGTGTAGTGAGCTTGGTACTGGTGAAGAGGTCACTCATTGTGCTGAAATTGGAGTATTTCTCAAACGCGTGTGTGATGTTATCG
GCTGTAACAAGGGTAGAGAAGAGGAGTAAGAGGGTTAGCGAGAGGAGAGAAAAGGAGGCGTTGAGACCCATCTTGTGTGATAGATA
GTGAAAAGCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867304 hypothetical protein ARALYDRAFT_491605 [Arabidopsis lyrata subsp. lyrata]8221e-085
NP_194865 FASCICLIN-like arabinogalactan protein 5 precursor [Arabidopsis thaliana]8061e-083
NP_180021 fasciclin-like arabinogalactan protein 3 [Arabidopsis thaliana]6931e-070
XP_002880584 hypothetical protein ARALYDRAFT_481301 [Arabidopsis lyrata subsp. lyrata]6868e-070
ABV27488 fasciclin-like arabinogalactan protein 17 [Gossypium hirsutum]5066e-049

Swiss-Prot top hits (Blast detail)Scoree value
O49586 Fasciclin-like arabinogalactan protein 58064e-085
Q9ZQ23 Fasciclin-like arabinogalactan protein 36936e-072
Q9LTW9 Fasciclin-like arabinogalactan protein 143432e-031
Q9SU13 Fasciclin-like arabinogalactan protein 22681e-022
Q9FM65 Fasciclin-like arabinogalactan protein 12671e-022

TrEMBL top hits (Blast detail)Scoree value
A9XTM2 Fasciclin-like arabinogalactan protein 175064e-049
B9SPQ1 Putative uncharacterized protein4851e-046
A5BYV9 Putative uncharacterized protein4823e-046
B9NA05 Predicted protein4528e-043
B9N6A9 Predicted protein4374e-041

Arabidopsis top hits (Blast detail)Scoree value
AT4G31370.1 FLA5 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 PRECURSOR)8064e-086
AT2G24450.1 FLA3 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 PRECURSOR)6935e-073
AT3G12660.1 FLA14 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 PRECURSOR)3432e-032
AT2G45470.1 FLA8 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8)3038e-028
AT4G12730.1 FLA2 (FASCICLIN-LIKE ARABINOGALACTAN 2)2689e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  15%
 
74  31%
 
64  31%
 
92  15%
 
81  8%

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