Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN10496

FASTA Sequence
Unigene ID: UN10496Length: 890  SNP
AAGAACGATAGAAGAAGAAGCAACTTCAAATGAAAATTACTAATTGCAAATCACAGGGTGGGATTAAGACTAACCACACAACTAAG
TAGTAGAATAATACAACAAGGATTAGAGATAAAACGACGCAAAGTCCCAATGCTTAAGTAGTAGTAGGAAATAGCAAGGATTAGAG
ATAAACAAAGCAACGTCCAAATGCTTTTAAGTAGTAGAAAACAACACGGATTATAGATACACAAACCAAAGTCTCTCACCCCTAGG
CTTCAGCGTTGACAACAGCACTCGACATTTGCTGAGAAGATGCTGCTTCACTCTCAAGAAGCCACTCCCTGGCGCAAATCAGAGCC
TCCACAGTCTCAGGCCTCAGAGACGTCTTGTACTCATCCATCTCCCTCGGTTCCATGTCAAACACATAGTCGAAGGCTGCAGCTGA
AACCGGGATGGAGAGGATGTCTCTAGCCATCTTGCACAGTGTCGGGTACTTGAGCTTGTTCTGTTTCCACCAGTCTAAAACATCAA
ACTCCTGAACACGAGGAAGCAGCGTTTCGTCAAGGTACTGGTCCAGCTCTGACTTGAGGTTCTGCCCTGTTGTCTCCAGTATGTAG
TTGTCGAAATCAGACAGCCCGTCTGCCTCGGATGCTGGTTTTAGCGGTGCAGGGAGTGCCATGTACTCGTTGAAGAGCTCGTGGAT
CCCATCATCAACGGTCTTGATGTTCTTCCCAGCGTCTTCTCCGAATATCTTGGAGAAGCTGAACTCCACCAGCTTCATCTTGAACC
GAGGATCCATCACAACCGCCATCGCCAGAACCAAGCTACACTCCCTCCAGTACTTGTCAACCTTCTCCTTCATGGTTTTAGCTATG
CCAGCTACATAAGGATCCTCTCCCGCTATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABA18106 hAT-like transposase [Capsella rubella]9966e-106
ABA18109 hAT-like transposase [Arabidopsis arenosa]9966e-106
XP_002875576 hypothetical protein ARALYDRAFT_323059 [Arabidopsis lyrata subsp. lyrata]9931e-105
ABA18094 hAT-like transposase [Olimarabidopsis pumila]9724e-103
NP_189803 BED zinc finger and hAT dimerization domain-containing protein [Arabidopsis thaliana]9601e-101

Swiss-Prot top hits (Blast detail)Scoree value
P08770 Putative AC transposase2104e-016
P03010 Putative AC9 transposase2095e-016

TrEMBL top hits (Blast detail)Scoree value
Q287U9 HAT-like transposase9964e-106
Q287V4 HAT-like transposase9964e-106
Q287W8 HAT-like transposase9723e-103
Q5IH79 HAT-like transposase9607e-102
Q9M2N5 At3g421709607e-102

Arabidopsis top hits (Blast detail)Scoree value
AT3G42170.1 DNA binding9613e-104
AT1G18560.1 DNA binding / protein dimerization1818e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
106  67%
 
91  11%
 
82  22%

Unigene MembersMember information