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Information for unigene UN10507
| FASTA Sequence |
| Unigene ID: UN10507 | Length: 1320 |
| SNP | GCACCTTCCTCTCCTTTCAAACTCCTCAACCAAAAAGAAAGAAGAACTCATCCTTTTTTTTGTTAGATTACACTTTTTCCATCTTC
TTTGCATTTTTCTCTCTGTCTCTCTTTTTGTTCCATCAGATCATTCATAAAGCCAATCCAGCCACTTGGTGACTGTCCTCAATCGA
TTCCTTGTTCACCATCTTGAGGGAGAAGACAATGAGTGTTGAGGTACGGTCAAGAGTCTTTGACCAAGAAGCTGGCTCAACTCTAG
CTTCGTTGAGAGATGGTGATCCGTCGACACAAAGGGGTTTTCGATGTATCCCTTATGAATTAGATCTCAATCCCCTACGCATTGTA
GTAGCGGAATTGGTGGGGACATTCATTCTAATGTTCAGCGTGTGTGGGGTCATAAGCAGTACTCAGTTGTCCGGCGGTCATGTCGG
ATTGCTAGAGTACGCCGCGACGGCTGGTCTATCGGTGGTTGTCGTAGTTTACTCCATCGGACACATCTCCGGCGCCCATCTCAACC
CTTCCATCACCATTGCTTTCGCCCTCTTTGGCGGATTCCCATGGTCTCAGGTTCCGTTATATATAACGGCGCAGACGATGGGGGCA
ACGGCGGCAACATTAGCTGGGGTGTCAGTCTACGGAGTAAACCCTGACCTAATGATAACAAAACCTGCGTTAAGCTGCGTTTCTGC
GTTTTTCGTTGAACTCGTTGCTACGAGCATCGTCGTCTTTCTAGCCTCCGCGTTACATTGTGGTCCTCATCAAAATTTGAGTAATT
TGACGGGGTTGGTGATTGGAGCAGTCATATCCCTTGGAGTGCTTATTACCGGACCGATTTCGGGAGGATCGATGAACCCAGCTCGA
TCACTAGGACCGGCGGTGGTGGCATGGGATTTTGAGTATATATGGGTTTACATGACTGCTCCGGTGATCGGAGCCATTATCGGTGT
TTTGACATACAGAACTATTAGCCTCCAAAGCAGGCCTTCTCCACATTCCCCTCCAGTCTCTTCGCTTTTACGCTGACCGACCATTC
AGCTCAAATCCTAGTATGATATCTAATTAAGTTATAACCTTAATTACTCCCCAAATAAACCTTATTACTCTACTCTTAATGTAGCC
CGTTATGCCTATATGGAGCCTCGATTGATACTACTAGTGAATTCTAATGTTTGCTTGGATATTCATATTTTACAAGAATCCATTTT
AAGTTCTTATTAATATATGAAATGTCTATATTAATATGAAGCATTTTTATTATTTTAATCTATATTTTAATAGGGGTGTTTGTATT
AAAAATGGGAATGAAATGCAGAGGCAAATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566271 putative aquaporin NIP7-1 [Arabidopsis thaliana] | 1189 | 5e-128 |
| ABK28544 unknown [Arabidopsis thaliana] | 1189 | 5e-128 |
| XP_002884559 hypothetical protein ARALYDRAFT_477911 [Arabidopsis lyrata subsp. lyrata] | 1187 | 8e-128 |
| AAM65333 putative major intrinsic protein [Arabidopsis thaliana] | 1185 | 1e-127 |
| AAF30303 putative major intrinsic protein [Arabidopsis thaliana] | 1142 | 1e-122 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LAI1 Probable aquaporin NIP7-1 | 1189 | 2e-129 |
| Q0DK16 Aquaporin NIP1-3 | 460 | 7e-045 |
| Q9FIZ9 Putative aquaporin NIP4-1 | 456 | 2e-044 |
| Q9ATN4 Aquaporin NIP1-1 | 453 | 5e-044 |
| Q40746 Aquaporin NIP1-1 | 447 | 2e-043 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RTV9 Aquaporin NIP1.1, putative | 728 | 1e-074 |
| B9HMD8 Aquaporin, MIP family, NIP subfamily | 703 | 8e-072 |
| D2KZ48 Nodulin-26 like intrinsic protein | 466 | 2e-044 |
| B8AZ46 Putative uncharacterized protein | 462 | 7e-044 |
| A9P2J2 Putative uncharacterized protein | 459 | 2e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G06100.1 NIP7;1 (NOD26-LIKE INTRINSIC PROTEIN 7;1); water channel | 1190 | 1e-130 |
| AT5G37810.1 NIP4;1 (NOD26-LIKE INTRINSIC PROTEIN 4;1); water channel | 456 | 2e-045 |
| AT4G10380.1 NIP5;1; arsenite transmembrane transporter/ boron transporter/ water channel | 439 | 2e-043 |
| AT5G37820.1 NIP4;2 (NOD26-LIKE INTRINSIC PROTEIN 4;2); water channel | 434 | 7e-043 |
| AT1G80760.1 NIP6;1 (NOD26-LIKE INTRINSIC PROTEIN 6;1); boron transporter/ glycerol transmembrane transporter/ urea transmembrane transporter/ water channel/ water transporter | 428 | 3e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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