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Information for unigene UN10512
FASTA Sequence |
Unigene ID: UN10512 | Length: 1022 |
SSR | | CACATAATAGATGCATTCCAACACTAAGAGAATGCTTTGGCATAAAGAACCAAACAAAGGTACTGTATATTATTAGAACTTCTTTT
GTTTTCTTAAAATCTTATTTCGTGAAAACCGAAAATAAAATGACTTTCATTATAAATTTATAATTAGTTTTTTCTTAGACTATTAC
TTGGTTTAGAGTCTTGAGGGCATTCCTCCAGCGACGACCAAAGTTTCTCCGGTGATGTAAGAAGAATCATCAGATGCTAAGAAAGC
CGTAGCAGCAGCCATGTCTCCTGTTGTTCCCAACCTATTAAGCAGAGTCTTCTCTTCGATGCTTTCCCTCACTTGGGAGTTTCCGG
TGATGAAAGAAGCAAAGTGTGTGGGCACAAAACCGGGAGCAACCGCGTTGACACGTGTGTCCGGACCCATCTCAGCAGCAAGAGCC
TTGGTTAGTCCGAGAAGAGCAGTCTTAGTGACACCATACATAGCCATGGATCCTTGTGGTTGAAATCCAGCGATAGAAGTTATGAA
AATAACAGAAGAGCCCTTCTCTAAGTGAGGAGCCATATCCTGAAGGAGAAGTATAGATGATTTGACATTGATTTCCCAAAGCTTGT
CGAGGACAGCTTCTTTGGTGGACAAGATTGGGTCTGTAGATGGATTAGCAGCGGCGTTACAGACAAGGATATCTATCTTTCCATAT
TTCTGAACAGTCTTTTCGACAAGATTACGGCGATGTTGAGCATTGGAAACGTGACAGACAATTCCATAAGCATCAATCCCTTTGGA
TTTGAGTTTTTCTACTGCTTCCTCAACATTTGCCTGCTTGCGGGAAGAAACGACGACGGAAGCGCCTTCGAGACCGAAACGCTCGA
TGATACCGAAGCCGATCCCTTGCGTCGAAGCCGTTACTATCGCCACCTTTCCTTCCAATCTCCTCCCTATCTTCTTCCCCTCCATT
TCTCTCTCTCTCTCTCTTTCTTTTTTCTTTTTTACCTTCTTTCTCTCTCTTAGCCGATGATGATTGATGAGTGTCC
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GenBank top hits (Blast detail) | Score | e value |
XP_002874790 short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] | 1197 | 4e-129 |
NP_567300 dehydrogenase/reductase SDR family member 4 [Arabidopsis thaliana] | 1187 | 6e-128 |
XP_002264497 PREDICTED: hypothetical protein [Vitis vinifera] | 1039 | 8e-111 |
ABZ02330 short chain alcohol dehydrogenase [Arabidopsis halleri] | 1028 | 2e-109 |
ABZ02331 short chain alcohol dehydrogenase [Arabidopsis halleri] | 1025 | 4e-109 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9BTZ2 Dehydrogenase/reductase SDR family member 4 | 574 | 3e-058 |
Q5RCF8 Dehydrogenase/reductase SDR family member 4 | 572 | 5e-058 |
Q8WNV7 Dehydrogenase/reductase SDR family member 4 | 548 | 3e-055 |
Q9GKX2 Dehydrogenase/reductase SDR family member 4 | 547 | 4e-055 |
Q99LB2 Dehydrogenase/reductase SDR family member 4 | 546 | 5e-055 |
TrEMBL top hits (Blast detail) | Score | e value |
Q9S9W2 AT4g05530 protein | 1187 | 4e-128 |
B1P4A6 Short chain alcohol dehydrogenase (Fragment) | 1028 | 1e-109 |
B1P4A7 Short chain alcohol dehydrogenase (Fragment) | 1025 | 2e-109 |
B1P4C8 Short chain alcohol dehydrogenase (Fragment) | 1023 | 4e-109 |
B1P4C5 Short chain alcohol dehydrogenase (Fragment) | 1017 | 2e-108 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT4G05530.1 IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1); binding / catalytic/ oxidoreductase | 1188 | 2e-130 |
AT2G29150.1 tropinone reductase, putative / tropine dehydrogenase, putative | 324 | 3e-030 |
AT2G29260.1 tropinone reductase, putative / tropine dehydrogenase, putative | 319 | 1e-029 |
AT5G06060.1 tropinone reductase, putative / tropine dehydrogenase, putative | 314 | 4e-029 |
AT2G29370.1 tropinone reductase, putative / tropine dehydrogenase, putative | 303 | 7e-028 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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