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Information for unigene UN10521
| FASTA Sequence |
| Unigene ID: UN10521 | Length: 901 |
| SNP | AGTGAAGAAAATGCTTTTCAAAACTTAACTTTGACAATTTGTCACAAATTGAAAACGGTTATGAAACATCAAGTTGTGAAAGAGTA
GTGAACAGGGAGGACAATACAAAACTCAAAAGACTTCAAAAGTTTTTCAGACAGAAGACAATATCTTCTCAGGCAGCAAGATCAGG
AAGTGTGTTCTGGATGTTGTAAGGCATCAAGATGTTGAACCCATCTTCAGCGGTTGAGATGATCATCCCTGGAATCTGGTTGTGCC
AGTGAAGTTCCTTCAAGTCCTTTTGTCCCTGGTGAACGAAAAGAAGCTGAGGAGGCAAGTCTTGAGGTGTATTAACTTGTTCCTTA
GTCTGTGCTTTGAACTCTGCTTCCTCTTCTTCATCCTTCTCTAATGATAAATCCCATATCGTGAGCTGGTTATCGCCAGAAGAGAC
TGCAAGTGTTGAGGATTCATGAGCGCTCCACTCAATCGACGTGATAGGATGCTTATGATACTCAAAATGTGCTACCTTAGCATCTC
CCTCCTTGATAACTCTAAGATCATGGATAGAGAATGCCCCGTCATCACTCCCTGAGGCCAACATGCAACTAGCCAACCTGTTCCAT
GAGATGACATTCACATCTGCGTTATGTGCTTTGAAAGATAATGCAGGCGTCTTCCCAACTCGGACATCCCATAGTGCAATAGTCCC
ATCCACGGAACACGACGCAAACACGTTGGCTTCAGCTGGACTCCATTGTAAATCTTCAACACTTGCGGTGTGTCCTGTTAACGGAA
TAGGATCAACAGTCCATGAACCAGAAACTGGTTCCCACAGATGAATCATACTCATGCAGTCCCCGGAAAGAAGTCTTCCAGCAGTA
GCAGGACTCCAATCTATAGCATAGCCTTCATCTTTGTGGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002886033 transducin family protein [Arabidopsis lyrata subsp. lyrata] | 1217 | 2e-131 |
| NP_179544 transducin-like protein [Arabidopsis thaliana] | 1211 | 8e-131 |
| XP_002282252 PREDICTED: hypothetical protein [Vitis vinifera] | 1082 | 7e-116 |
| XP_002527727 WD-repeat protein, putative [Ricinus communis] | 1051 | 3e-112 |
| XP_002306305 predicted protein [Populus trichocarpa] | 1040 | 5e-111 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54ED4 Glutamate-rich WD repeat-containing protein 1 | 649 | 5e-067 |
| Q9BQ67 Glutamate-rich WD repeat-containing protein 1 | 620 | 1e-063 |
| Q1JQD2 Glutamate-rich WD repeat-containing protein 1 | 618 | 2e-063 |
| Q810D6 Glutamate-rich WD repeat-containing protein 1 | 618 | 2e-063 |
| Q5XI13 Glutamate-rich WD repeat-containing protein 1 | 615 | 4e-063 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZUN8 Putative WD-40 repeat protein | 1211 | 5e-131 |
| B9SP08 WD-repeat protein, putative | 1051 | 2e-112 |
| B9H4T0 Predicted protein | 1040 | 4e-111 |
| Q1HFN6 Immature pollen 1 | 1019 | 1e-108 |
| Q2RAX1 Glutamate-rich WD repeat-containing protein 1, putative, expressed | 1013 | 5e-108 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G19540.1 transducin family protein / WD-40 repeat family protein | 1211 | 3e-133 |
| AT2G16780.1 MSI2 (MULTICOPY SUPPRESSOR OF IRA1 2) | 253 | 4e-022 |
| AT4G35050.1 MSI3 (MULTICOPY SUPPRESSOR OF IRA1 3); protein binding | 251 | 7e-022 |
| AT5G58230.1 MSI1 (MULTICOPY SUPRESSOR OF IRA1); protein binding | 221 | 2e-018 |
| AT1G29260.1 PEX7; peroxisome matrix targeting signal-2 binding / protein binding | 175 | 4e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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