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Information for unigene UN10526

FASTA Sequence
Unigene ID: UN10526Length: 784  SNP
GAACACAATGTATATATATGGTGATGATGATAATGTACTCGGGAGAAAGTCATTTACAAACAAAGGAAAACGAACAAATACTCAAA
ACAAAAACCAAAACAAAACAGAGCTTTGCTTTTTGCCCGGTTTAGACAACGATCTTTCATGGCTTACACTAACAAAATCTCGGCAG
CAGCTGCGGTTGCGACAGCGATGCTATTTTTAGCGGTCATGATCGCTCCCCGGTGGACGGAAGCACAAACGATGCCAAAGCTGGAT
CCAGTGTGCGCTTTGTTGATCACTGACACCCTCACCAAATGCTACTTAAGCGGGAATTTGACGCCATCTGATGACTGCTGCAGCGC
TCTCAAATCGGCGACCGATAGGCAAGTAACTTGTCTCTGCGACGATTTCATCGCACATTCTTCTGACAACAACGTCACGCAAGCTC
TGTTGGAAGTATACCACAACGACTGTGGCGTTGCTGACAAGTTTGCCTGCAAAGGAAACTCCAATGGAGGAGCAATGAAGAAGATC
AGTGCATCAATTGGTCTACTTGGTTTGGCTGCAAGTCTGTTCTTTTAATTAATTAAAGCTTGGGCTTATCAAATACTCCTGTAATT
CTTCTTCTTTCTTATTTTGTTGTTTGTATTTTTTGTTTTCTTCCATAATCTGACAGCTCGAAAACTCATTTAGTTGGTCATTGCAT
TTGTAACAAGCTTTGTTTGTAAATGGTTGTACGTCTGCTTCTGAAATTTATTATCGGATTATCACTATTTTTTTTGAGCAATATTG
GATTATCACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA16549 putative protein [Arabidopsis thaliana]3747e-034
XP_002869816 hypothetical protein ARALYDRAFT_492605 [Arabidopsis lyrata subsp. lyrata]3146e-027
NP_193995 bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein [Arabidopsis thaliana]3138e-027
NP_001031699 bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein [Arabidopsis thaliana]2797e-023
NP_193994 bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein [Arabidopsis thaliana]2771e-022

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O49645 Putative uncharacterized protein T12H17.303745e-034
Q9SUV7 At4g226403136e-027
Q2V3F9 Putative uncharacterized protein2795e-023
O49644 Predicted protein2778e-023
B3H5X1 Uncharacterized protein At4g22666.22697e-022

Arabidopsis top hits (Blast detail)Scoree value
AT4G22640.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to membrane; EXPRESSED IN: male gametophyte, root; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22666.2); Has 19 Blast hits to 19 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3133e-029
AT4G22666.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (TAIR:AT4G22630.1); Has 44 Blast hits to 44 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2793e-025
AT4G22630.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein2775e-025
AT4G22666.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (TAIR:AT4G22630.1); Has 44 Blast hits to 44 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2694e-024
AT4G22650.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22640.1); Has 19 Blast hits to 19 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1557e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  25%
 
83  19%
 
116  38%
 
122  13%
 
61  6%

Unigene MembersMember information