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Information for unigene UN10547

FASTA Sequence
Unigene ID: UN10547Length: 1164 SSR 
CGGGGTTTTGATCAACTCGTAATTAAAGACGGTTTCAATGAAAACACACTCAGAGAGTCAGTCAGAGTTATCAATGGTGAAAGAGA
GAAAACTTGAAGAATTAAATCAGTTGAAGGGATTAGAAACAAACTCTGCCATTACTTTTATCGAATTCGACTCAGAGACAACTTAA
GTCCTAAAACACAATTAGATAGAGTTTCAAATCACAGGACGAGATTTCTGAGTATTTTTAAAATTCCAACTCTACTTGGCTCTTGC
CTTCTTATTAGAGAGACTGCTAACAATGAAATCATCATCATCATCATCAGAATCCTTCTTCCGCTTCTTCGTGGTTGGTTTCGAAT
CATTTCCTTTCTTTTTGCCTGACAAAGCTTCAGACGACGGTTTTTTAACTTCCTTCTTCTCGGCCACTAGTGATTTGGAGCCGGTT
CTTGGGGCACTTCTTGGGGTGGAAGGTGCAGATTTTGTAGGAGAGCTGAGCTTTCCAGTCTTTTGCAACTTCTTCTCAAGAACTTT
CTTTGCCTCTGCAGCTGGAAGCAACCCTGACTCCATCATCCAAATCTTAGCCATTTCGCTAGTTGGAACTTGCTTGTGAAGTGACT
CATAGAAAATCCTAAGTGGATCTCTCTCCTCAGGTTGGTCTCTCTTCTGACCAGGCAAATCATAAACTTTCTTCTCCTTCTTCTTC
TTCACATCTCCTTCTTCTTTTTTCTTCTTCTTTGCCTCTTCTTCTTCTTTCTCTTTCTCTTTCTCCATCTTCTTTTTCTTCAACTC
TTTCTCCTTTGAGACGACGCCAGCAGATGAATTCCTCTTGGAAAGAGGCTTGTCATCGTCGTCTTCTTCAGCAATCTCCTTCTTCT
TCACTGGCTTTGGGCGAGACCCAGATAAAGATGACTTGATGGGTTTGTCATCATCGTCTTCGTCCTTCTTCAATTTCCTCGAAGCT
GACGAACCAGCATTGTTGGCGTTTGTGGGCTTCTTCTTAACCAATGAACCCAAGCTCTTGTTATCGTCGTCAGCCTCCTCTTTCTT
CACTGCTTTAGCATCATCCGATGTCATCCTTCCTTCTTCTTTCTCCTACCAACAAGCTTTGGGGGAGATTTCAGACGGAAACCGCT
GTCGTGTGTTTCCCCCTTGGGTCAGGTCAGTTATGCCCTAATCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAF79914 Contains a weak similarity to Rap8 (Rac-3-1) gene from Rhynchosciara americana gb|U69899 [Arabidopsis thaliana]8382e-087
XP_002890362 hypothetical protein ARALYDRAFT_312926 [Arabidopsis lyrata subsp. lyrata]8373e-087
NP_173428 uncharacterized protein [Arabidopsis thaliana]7943e-082
XP_002510538 conserved hypothetical protein [Ricinus communis]5263e-051
XP_002306929 predicted protein [Populus trichocarpa]4833e-046

Swiss-Prot top hits (Blast detail)Scoree value
Q6C1L3 Protein PXR11783e-012
Q55FI4 Nucleolar protein 581651e-010
A5E4P1 Protein PXR11632e-010
Q9VJ87 Pre-mRNA-splicing factor CWC22 homolog1542e-009
Q54J55 Myb-like protein X1505e-009

TrEMBL top hits (Blast detail)Scoree value
Q9LNS7 T20H2.23 protein8381e-087
B9R895 Putative uncharacterized protein5262e-051
B9H4X9 Predicted protein4832e-046
B7FL43 Putative uncharacterized protein4814e-046
A9P7U6 Putative uncharacterized protein4805e-046

Arabidopsis top hits (Blast detail)Scoree value
AT1G19990.1 unknown protein8405e-090
AT5G11600.1 unknown protein2714e-024
AT3G28770.1 unknown protein1829e-014
AT1G56660.1 unknown protein1424e-009
AT5G40340.1 PWWP domain-containing protein1424e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  23%
 
116  46%
 
84  31%

Unigene MembersMember information