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Information for unigene UN10578

FASTA Sequence
Unigene ID: UN10578Length: 852  SNP
TTATATCAATTAAGTTTATTATTATTAGATAATCATATTTTCCACATCCTTTCCAATCACGAGGTACATACATGATTATCTACAAC
ACATATTAGTTACAAACATACATCAAAATGAACCTTTCTTTCATCACCATTGACAACAACAATAAATCAATAGTAGTAAAAGGACA
AAGGTGGTGGGAGCAACGAATCGGTATCTTTCTGGTTGAGTTTGGTCTTAATGTTGAGAGTATTAAAGACTTTGTCCATTCCAGCG
AACACATCCACTGACTCGCCACTCATTCTTTTCCCAAGCCCTATCCCTCCTTGAACCTCTTTCAACAATGTTTTGTCGTAAATGTC
ATCGAGACAACTCGACTGGTAGTTAAAGATTGAAGTCATCTTCTTCTTACATGTGAAGTAGTTATTAGCCATGCTCTTTATGTCTT
TTCCCGCGGCTTTCCAGAAATCTGAAAAGTCTTCCAAGGCGTTGTTTAGCTGTTTCTCGCAACTAGTGATGCAAGCTGTGGCGAAA
GCGTTTCCTTTGTACTTGGGTTTAATTCCGGAGAGGAACTTCAATCCCTTTTTAACGGAGGTTTCTGCACCTGTGGCTAAGTGACG
GACCAAAATGTTTGGATCATTGCTTGGGACAGTTTTCAAGGTTATGCTACAAAGACTTTTGTCTTGGACGACGCTGCATATTCCTG
CGACGGCTTTCTCATGTTCTGGTGTAACAGCGTCACGTTTGGCTGGGACTACGAACGCGGTTGCGGTTAGGGCGATACAAAGAATG
AGAAAGGCGAGTTTTATAGGAGTGTTCATTTTTTTTGGTTTTTTTTAGGTAACTTCAACGTGGATTGGAAAGGATTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_182228 plant invertase/pectin methylesterase inhibitor domain-containing protein [Arabidopsis thaliana]9733e-103
ABK28540 unknown [Arabidopsis thaliana]9733e-103
XP_002882103 invertase/pectin methylesterase inhibitor family protein [Arabidopsis lyrata subsp. lyrata]9662e-102
AAM64864 putative pectinesterase [Arabidopsis thaliana]9591e-101
XP_002878441 invertase/pectin methylesterase inhibitor family protein [Arabidopsis lyrata subsp. lyrata]6221e-062

Swiss-Prot top hits (Blast detail)Scoree value
P41510 Probable pectinesterase/pectinesterase inhibitor2411e-019
Q42608 Pectinesterase/pectinesterase inhibitor (Fragment)2392e-019
Q5MFV8 Pectinesterase 52373e-019
Q5MFV6 Probable pectinesterase/pectinesterase inhibitor VGDH22086e-016
O80722 Pectinesterase 42086e-016

TrEMBL top hits (Blast detail)Scoree value
A0MET9 Putative uncharacterized protein (Fragment)9732e-103
O80720 Invertase/pectin methylesterase inhibitor family protein9732e-103
Q8LBB4 Putative pectinesterase9598e-102
Q9M1Q6 At3g621806192e-062
Q2PYP0 Pectinesterase2411e-018

Arabidopsis top hits (Blast detail)Scoree value
AT2G47050.1 invertase/pectin methylesterase inhibitor family protein9749e-106
AT3G62180.1 invertase/pectin methylesterase inhibitor family protein6262e-065
AT2G47040.1 VGD1 (VANGUARD1); enzyme inhibitor/ pectinesterase2373e-020
AT2G47030.1 VGDH1; enzyme inhibitor/ pectinesterase2086e-017
AT3G62170.1 VGDH2 (Vanguard 1 homolog 2); enzyme inhibitor/ pectinesterase2086e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  6%
 
63  19%
 
118  50%
 
91  6%
 
83  19%

Unigene MembersMember information