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Information for unigene UN10583

FASTA Sequence
Unigene ID: UN10583Length: 1186  SNP
GGAACCACACAACATAGAAGCAAAACAAAAACCATTTGCTGGAAAGGAAAAAAAGCAAAGAAATAAGTAATGGCCAAGGACGTGGA
AGCCGTTGCCGGAGAAGGGTTTCAGACAAGAGACTATCAAGACCCGCCGCCAGCGCCTCTGTTTGATCCGGAGGAGCTGACGAAGT
GGTCTTTTTACCGAGCAGTCATCGCCGAGTTCGTAGCTACTCTCCTCTTCCTATACATCACCATTTTGACAGTCATCGGTTATAAG
GTTCAGACAGATAGTACTGCTGGCGGCGTTGACTGCGGTGGAGTTGGCATCCTTGGTATCGCTTGGGCCTTCGGTGGCATGATCTT
CATTCTCGTCTACTGCACCGCCGGTATCTCTGGTGGTCACATAAACCCGGCAGTGACATTTGGGCTACTCTTGGCCCGAAAAGTAT
CCTTGGTTAGAGCCATATTGTACATGGTAGCTCAGTGTTTGGGTGCAATTTGTGGAGTTGGGTTCGTCAAAGCCTTCCAAAGTGCT
TACTACGTCCGTTACGGTGGTGGAGCCAACTCTCTAGCCGATGGCTACAGCACGGGTACTGGCCTGGCTGCAGAGATCGTCGGTAC
TTTCGTTCTTGTCTACACAGTCTTCTCGGCCACTGATCCTAAACGCAGTGCCAGAGACTCCCATGTTCCAGTGTTGGCTCCACTTC
CTATTGGATTTGCGGTGTTCATGGTACACTTGGCTACCATTCCCATCACCGGAACTGGAATAAATCCTGCGAGGAGTTTCGGAGCA
GCCGTCATCTTCAACGAGAGCAAGCCATGGGATGATCACTGGATCTTTTGGCTGGGACCATTCATTGGAGCTGCGATTGCTGCAGT
CTACCACCAGTTTGTTCTTAGAGCTTCAGGTTCCAAGTCTCTAGGGTCTTTCAGAAGTGCTGCAAACGTCTAATAAATGCTTTTGC
CCACCAAAACGCATTCTGAAATAATAAGATGATAACTAAAAATAGTTATCTTTTCTTTATGTACAAATTATCTAAATCAAATCTCT
GTTTTCTTATTTATGTCTTCTACTTGCTTTTGCAATTTCATTCGGTGTAATTGTTTTTTCTTACACCACTGCCAAGTTTATCGAGT
GACTGAATTAAAATCAATGAGGTTGTATTCTTGCATTTGCGTTTATGTTTTACCAATGTTTTCGTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAA32778 Plasma membrane aquaporin (PAQ2) [Raphanus sativus]14744e-161
AAD39373 plasma membrane intrinsic protein 1 [Brassica napus]14672e-160
XP_002877918 hypothetical protein ARALYDRAFT_485715 [Arabidopsis lyrata subsp. lyrata]14045e-153
NP_190910 aquaporin PIP2-1 [Arabidopsis thaliana]14001e-152
XP_002881493 hypothetical protein ARALYDRAFT_482707 [Arabidopsis lyrata subsp. lyrata]13893e-151

Swiss-Prot top hits (Blast detail)Scoree value
P43286 Aquaporin PIP2-114006e-154
P43287 Aquaporin PIP2-213683e-150
P30302 Aquaporin PIP2-313576e-149
Q9FF53 Probable aquaporin PIP2-412367e-135
Q9ATM6 Aquaporin PIP2-412341e-134

TrEMBL top hits (Blast detail)Scoree value
O80369 Plasma membrane aquaporin (PAQ2)14743e-161
Q9XHG7 Plasma membrane intrinsic protein 114672e-160
Q9MB99 Plasma membrane aquaporin 2b13481e-146
Q9MB98 Plasma membrane aquaporin 2c13471e-146
Q9XHG6 Plasma membrane intrinsic protein 213471e-146

Arabidopsis top hits (Blast detail)Scoree value
AT3G53420.1 PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channel14014e-155
AT3G53420.2 PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channel14014e-155
AT2G37170.1 PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2); water channel13692e-151
AT2G37180.1 RD28 (RESPONSIVE TO DESICCATION 28); water channel13584e-150
AT5G60660.1 PIP2;4 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;4); water channel12366e-136

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  33%
 
113  50%
 
71  17%

Unigene MembersMember information