Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN10584

FASTA Sequence
Unigene ID: UN10584Length: 1186  SNP
GCAGGAAAACTCGTTGCTGGATAACACGGCGAGAATTGAAGATTGGTTAGCTAGGTTTCCCATGTACGACTGGGTGGGTGGAAGAA
CATCAGTTATGTCTGCAGTTGGTCTGCTTCCAGCTGCACTACAGGGAATTGATATTAGAGAGATGCTTGCTGGTGCTGCAATAATG
GATGAGGCTACTAGGACAACTTCGCTCAAGAATAACCCTGCAGCGCTCTTAGCAATGTGTTGGTACTGGGCTTCTGATGGCGTTGG
TTCCAAGGATATGGTTATCCTTCCTTACAAGGATAGCTTATTGCTATTTAGCCGGTATCTGCAGCAGTTGGTCATGGAATCACTAG
GAAAGGAGTTTGATCTTGACGGTAACACTGTTAATCAAGGGCTAACTGTATATGGAAACAAAGGGAGCACAGATCAGCACGCCTAC
ATTCAACAACTGAGGGAGGGTGTGCACAACTTCTTTGCAACCTTCATAGAAGTGCTACGTGACAGACCTCCGGGTCATGATTGGGA
GCTTGAGCCAGGTGTCACTTGTGGTGACTACCTCTTTGGGATGCTTCAGGGAACTAGATCTGCTTTATATGCAAACGGTAGAGAGT
CCATTAGTGTTACCATCGAGGAAGTGACACCAAGATCCGTTGGGGCTATCATAGCTCTTTATGAAAGAGCGGTCGGGTTGTATGCC
TCACTTGTCAATATTAATGCTTACCACCAACCTGGTGTGGAAGCCGGGAAGAAGGCGGCAGCTGAAGTTCTGGCGCTGCAAAAGCG
TGTATTGTCAGTTCTTAACGAAGCCAGTTGTAAAGATCCGGTAGAGCCATTGACACTGGACGAGATAGCTGATCGTTGCCATGCTC
CTGAAGAAATTGAGATGATATACAAGATCATAGCTCACATGTCTGCAAACGACAGAGTTTTGATAGCTGAAGGTAGCTGCGGATCG
CCAAGGAGTGTTAAAGTGTACCTGGGAGAGTGCAGTGTGGATGACATGTTCGCATAATAAAACTTTCCTCAAACGCACAAATGAGT
CTCAATCTCTGTTCTGTTGTTTTTCCTTATTTATTTCTGCCAAACGTCTATGATTTTGAAATAAGAAAAAAAAAAGATTGCAATAA
GAACAGGAAACAACTTGTGTACTGAAAAACATTGCAGGGTTCATCAATCAATCACTTTTTTTGTGATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34119 unnamed protein product [Thellungiella halophila]16823e-185
XP_002867655 hypothetical protein ARALYDRAFT_492381 [Arabidopsis lyrata subsp. lyrata]16662e-183
CAA23001 glucose-6-phosphate isomerase [Arabidopsis thaliana]16591e-182
NP_194193 phosphoglucose isomerase 1 [Arabidopsis thaliana]16591e-182
AAF24124 phosphoglucose isomerase precursor [Arabidopsis thaliana]16393e-180

Swiss-Prot top hits (Blast detail)Scoree value
B2J5F1 Glucose-6-phosphate isomerase10923e-118
B7KJ74 Glucose-6-phosphate isomerase10548e-114
Q8YY05 Glucose-6-phosphate isomerase10531e-113
P52983 Glucose-6-phosphate isomerase10521e-113
Q3M6S3 Glucose-6-phosphate isomerase10493e-113

TrEMBL top hits (Blast detail)Scoree value
Q8H103 Glucose-6-phosphate isomerase16599e-183
Q9SB57 Glucose-6-phosphate isomerase16599e-183
Q9SEJ5 Glucose-6-phosphate isomerase16392e-180
B9GV29 Glucose-6-phosphate isomerase15872e-174
Q68HC8 Glucose-6-phosphate isomerase15755e-173

Arabidopsis top hits (Blast detail)Scoree value
AT4G24620.1 PGI1 (PHOSPHOGLUCOSE ISOMERASE 1); glucose-6-phosphate isomerase16604e-185
AT4G24620.2 PGI1 (PHOSPHOGLUCOSE ISOMERASE 1); glucose-6-phosphate isomerase14472e-160
AT5G42740.1 glucose-6-phosphate isomerase, cytosolic (PGIC)2105e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  18%
 
122  18%
 
102  18%
 
111  9%
 
84  36%

Unigene MembersMember information