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Information for unigene UN10589
| FASTA Sequence |
| Unigene ID: UN10589 | Length: 1291 |
| SNP | GCTCAGAAGAGAATGCATTTTTATTATTTACAAACTTCATCTTTCTTTAAAAAAAAAAGCAGAGAGAAATAGAGAGTCTAAGTCAA
AGAGTGCTCGCTCACACAAATCACCAGAGTGAATTAAATTTTATTAAATGAAAGCCTCTTTTTTGGCTTAGTTAATGTGCGGTGGT
AGAGACGGCGGCAGTAACGGTGGAGACAAGACTGTCAACGCCACAAATGTTACGGCCTTTGCAGATCTTGTAGAAACCCTTCTCAC
CCCAAGTCTCACCCCACGAGTTCTTGATGATCCAGTAAGGCTTCTCCTTGAACCTAGCCGGAGCATAACCAGCGGAGCCATAACCG
ACCAACAAGACACCGTGGTTGAGCCTCCTGGTGCAAATGTAAGGGCAGGAGACTCCGCCAATGTAAGTCTGCATATAGGCAGCGTT
GATGGCAACAGCAAGAGGTCCGTTTTGAACAAGGTTGGCAGCAATCTGGTCTTCGTCGATGGAGATGACACTGAAGTTGGAGACAG
AGGCAACGATCTTGGACTTGTCTAACTTGCAGATGGAGCCGTCCTCGCCGGTGTAAGGATAGTCATCTTCTCTCATGAGGCCTCCG
GATTTGAGGGTGTATTCAAAAGCGCTGTTCATGAGGCCACCATTGCAACCAGAGTCGCATGAACCGGCCTCATCTGGGTCACACTC
ATGATCACAGTCAACGAGCTGTTGTTCGCTAAGGCTGAGGAGTTTGCCGGTAGAGAGGAAGTTAGCACCTTCAAGAGCTCCGGTGG
CGCTGAAACTCCAGCAAGACCCGCATGATCCCTGGTTTTTGACGGGGGTGACGGCTCCGTGATCTCTCCAATCAAAATCCTGAGGG
AGATTCTCGGTAGGGAGAATGGGAGCCTTGTTGGCGTCTTTGGGGAGCTTGAACCCTCCTCTGACACCGAGATGCTTCTTCTTGAA
CTCTGATCGAGTCAGATCCGAGAACTGTGTAACGCCGTGACGAGCAGAGGGATCCATCTTCTGGTGACGCCTCGCTCTCCTCTGAT
TCGCTTTGAATACGGAGAACCTGTAGTCATGCTCCTCCCTCGTACCGTACACCTTTCCGAACTTGCTCTTGAACACAGAAAAGTGA
TGCTCGGAAGTTAAAACATGCGGCTCGGCTCCTCCATCAACCACCTGCCGGATCACGGCATCATCGCCGTCGGACGATGAAGAAGA
GACAGAGAGGGAGACGGAGAAGAGGAGGAGGAAAGAAAGAAGGAGAAGGGAAATCTTAACAAGTTTCATATTGGATTTTGAGATTC
C
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002868883 hypothetical protein ARALYDRAFT_490677 [Arabidopsis lyrata subsp. lyrata] | 1729 | 1e-190 |
| AAL60581 senescence-associated cysteine protease [Brassica oleracea] | 1717 | 3e-189 |
| BAJ33785 unnamed protein product [Thellungiella halophila] | 1714 | 6e-189 |
| NP_568052 cysteine proteinase RD19a [Arabidopsis thaliana] | 1699 | 4e-187 |
| AAM65162 cysteine proteinase RD19A [Arabidopsis thaliana] | 1694 | 1e-186 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P43296 Cysteine proteinase RD19a | 1699 | 1e-188 |
| P43295 Probable cysteine proteinase A494 | 1569 | 2e-173 |
| P25804 Cysteine proteinase 15A | 1366 | 6e-150 |
| Q10716 Cysteine proteinase 1 | 1260 | 1e-137 |
| P04988 Cysteine proteinase 1 | 688 | 3e-071 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8W179 Senescence-associated cysteine protease | 1717 | 2e-189 |
| Q0WWF3 Drought-inducible cysteine proteinase RD19A | 1699 | 2e-187 |
| Q8LAT5 Cysteine proteinase RD19A | 1694 | 9e-187 |
| Q058I7 At2g21430 | 1569 | 3e-172 |
| Q680L1 Putative cysteine proteinase | 1561 | 2e-171 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G39090.1 RD19 (RESPONSIVE TO DEHYDRATION 19); cysteine-type endopeptidase/ cysteine-type peptidase | 1700 | 1e-189 |
| AT2G21430.1 cysteine proteinase A494, putative / thiol protease, putative | 1569 | 2e-174 |
| AT4G16190.1 cysteine proteinase, putative | 1323 | 5e-146 |
| AT3G54940.2 cysteine-type endopeptidase/ cysteine-type peptidase | 1048 | 4e-114 |
| AT5G60360.1 AALP (Arabidopsis aleurain-like protease); cysteine-type peptidase | 551 | 2e-056 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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