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Information for unigene UN10596
| FASTA Sequence |
| Unigene ID: UN10596 | Length: 785 |
| SNP | ATATATGTATGACCAAAGCAATAGACAAACAAGTAAAAGAAATTAAAGAGAAAAAAAAAAGAAGATTACTTATGGCTTCCTCTATG
CTCTCCTCCGCCGCTGTGGCTACTTCACCGGCTCAAGCAACCATGGTTGCTCCATTCACCGGCTTGAAGTCATCCGCCACATTCCC
AGTTACTCGCAAGACCAACACTGACATAACTTCCATCGTAAGCAATGGAGGAAGAGTTAACTGCATGAAGGTGTGGCCACCATTGG
GAAAGAAGAAATTTGAGACTCTCTCTTACCTTCCTGACCTTACTGACGTTGAATTGGGTAAAGAAGTTGACTATCTTCTCCGCAAC
AAGTGGATTCCTTGCGTTGAATTTGAGTTGGAGCATGGATTTGTATACCGTGAGCACGGAAACACACCCGGATATTATGATGGACG
TTACTGGACAATGTGGAAGCTCCCCTTATTCGGATGCACTGACTCTGCTCAAGTGTTAAAAGAAGTTCAAGAGTGCAAGAACGAGT
ACCCTAACGCCTTCATTAGAATCATTGGATTCGATAACAACCGTCAAGTCCAATGCATCAGTTTTATTGCGTACAAGCCACCAAGC
TTCACCGGTGCTTAATTTCTTTTTCTAAAACATTCATATAAAAATTTGTACGCATCTTCCTGTCTATTGTCTGTCTTTTTTTCTTG
TTGGATTTACGTTTCAGAGACATTTTTATCGGATTGTTAAATGTCTGATTTATAAATATGTAATTTCTAAATCGCTTATTCTCTTT
GGGTAAAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
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| P05346 RecName: Full=Ribulose bisphosphate carboxylase small chain, chloroplastic; Short=RuBisCO small subunit; Flags: Precursor | 929 | 3e-098 |
| P27985 RecName: Full=Ribulose bisphosphate carboxylase small chain F1, chloroplastic; Short=RuBisCO small subunit F1; Flags: Precursor | 928 | 4e-098 |
| XP_002868775 ribulose bisphosphate carboxylase small chain 1B [Arabidopsis lyrata subsp. lyrata] | 928 | 4e-098 |
| CAA53083 ribulose-1,5-bisphosphate carboxylase /oxygenase, small subunit [Brassica napus] | 924 | 1e-097 |
| BAJ08160 ribulose 1,5-bisphosphate carboxylase/oxygenase [Brassica rapa subsp. chinensis] | 923 | 1e-097 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P05346 Ribulose bisphosphate carboxylase small chain, chloroplastic | 929 | 1e-099 |
| P27985 Ribulose bisphosphate carboxylase small chain F1, chloroplastic | 928 | 2e-099 |
| P10796 Ribulose bisphosphate carboxylase small chain 1B, chloroplastic | 911 | 2e-097 |
| P10798 Ribulose bisphosphate carboxylase small chain 3B, chloroplastic | 909 | 3e-097 |
| P08135 Ribulose bisphosphate carboxylase small chain, chloroplastic | 907 | 5e-097 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q43746 Ribulose bisphosphate carboxylase small chain | 924 | 8e-098 |
| Q306K0 Ribulose bisphosphate carboxylase small chain | 922 | 1e-097 |
| A1YN03 Ribulose bisphosphate carboxylase small chain | 917 | 5e-097 |
| Q0WVH4 Ribulose bisphosphate carboxylase small chain | 887 | 2e-093 |
| A1YMW8 Ribulose bisphosphate carboxylase small chain | 849 | 4e-089 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G38430.1 ribulose bisphosphate carboxylase small chain 1B / RuBisCO small subunit 1B (RBCS-1B) (ATS1B) | 912 | 1e-098 |
| AT5G38410.1 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) | 910 | 2e-098 |
| AT5G38420.1 ribulose bisphosphate carboxylase small chain 2B / RuBisCO small subunit 2B (RBCS-2B) (ATS2B) | 899 | 4e-097 |
| AT5G38410.3 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) | 894 | 1e-096 |
| AT1G67090.1 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate carboxylase | 887 | 1e-095 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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