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Information for unigene UN10598

FASTA Sequence
Unigene ID: UN10598Length: 833 SSR 
AGTTCACTTCTGGATTTTTGTTACAAATACTAATACTTTATCGGACATAAAACGATATATAAAACAACATATAACTATCACATTGT
AAATATAAACACGATACATAGCATATATGGGTATATATAATTAATAATTATGGCGGTAAATCAGCAATAAAAATAGGTATATATAA
GCAAATAATATTTAGTTTGTATTGAGAAGCTCCTCTATCATTTGCAAAGCAGCCTTCTCTTCTTCGTCCATTGCTCCTTCTCCTCC
TCCGCCGCCAACTTCAGTGGCTGGACCAACATCATCCTGTGAAGCATTTTTAGTAGGCTCTTGGGAGGAGCCAGCTGGGCCGAGCT
CCACCGTCATGACCCAACTGGAGTCGGACTTGGAACCGGCGCGCTTCTGCCAGACGCCGATGTGGGAGCTGGCCGTGTCAAGACGG
ATGCAGGTGAGGGAAGGCGAAGGAGACTTGCAGCATTTCCTCAGTTTGGCGCTGAGGATAGAAGAGAGTGGCGAAGAGGAGGATGA
AATATCTGTTTTGCCCTCCGATGTGTCTCCTGTGTTGTTGTTGTTGTTGAGGGGGAAGTTAGTCTTGGCGTTGCGGCCGCTCATTA
AAACAGCCGCCTCGTCGTAGGCTCTTGCTGCCTCCTCTGCCGTCTCAAACGTCCCAAGCCAAATTCTCCGTTTCAAGAGAGGATGA
CGAATCTCAGCGACCCAAGAACCCCAATGGCGTTGCCTGACACCTCTGAACTTCTTCGTCTGTACCATTCTTACTTACTCTGAGTT
CTTTTGTCAGAGAGAAAACATGAATTCCCTTATTACATTTGACGTCCTTACTAGTCTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABB55257 AP2 transcription factor [Brassica carinata]8407e-088
XP_002890099 hypothetical protein ARALYDRAFT_471733 [Arabidopsis lyrata subsp. lyrata]8318e-087
NP_172988 ethylene-responsive transcription factor WIN1 [Arabidopsis thaliana]8245e-086
AAM62938 putative ethylene responsive element [Arabidopsis thaliana]8173e-085
ABB55256 AP2 transcription factor [Brassica juncea]7091e-072

Swiss-Prot top hits (Blast detail)Scoree value
Q9XI33 Ethylene-responsive transcription factor WIN18242e-087
Q9LFN7 Ethylene-responsive transcription factor SHINE 25232e-052
Q3E958 Ethylene-responsive transcription factor SHINE 34792e-047
Q94AW5 Ethylene-responsive transcription factor ERF0032785e-024
P16146 Protein PPLZ022552e-021

TrEMBL top hits (Blast detail)Scoree value
A1X3G9 AP2 transcription factor8405e-088
A1X3G8 AP2 transcription factor7098e-073
B9RV55 DNA binding protein, putative6471e-065
B6T5Z6 Ethylene responsive element6229e-063
C5XXV9 Putative uncharacterized protein Sb04g0069706156e-062

Arabidopsis top hits (Blast detail)Scoree value
AT1G15360.1 SHN1 (SHINE 1); DNA binding / sequence-specific DNA binding / transcription factor8252e-088
AT5G11190.1 SHN3 (shine3); DNA binding / transcription factor5232e-053
AT5G25390.2 SHN2 (shine2); DNA binding / transcription factor4792e-048
AT5G25190.1 ethylene-responsive element-binding protein, putative2784e-025
AT1G78080.1 RAP2.4 (related to AP2 4); DNA binding / transcription factor2426e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  50%
 
112  50%

Unigene MembersMember information