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Information for unigene UN10598
FASTA Sequence |
Unigene ID: UN10598 | Length: 833 |
SSR | | AGTTCACTTCTGGATTTTTGTTACAAATACTAATACTTTATCGGACATAAAACGATATATAAAACAACATATAACTATCACATTGT
AAATATAAACACGATACATAGCATATATGGGTATATATAATTAATAATTATGGCGGTAAATCAGCAATAAAAATAGGTATATATAA
GCAAATAATATTTAGTTTGTATTGAGAAGCTCCTCTATCATTTGCAAAGCAGCCTTCTCTTCTTCGTCCATTGCTCCTTCTCCTCC
TCCGCCGCCAACTTCAGTGGCTGGACCAACATCATCCTGTGAAGCATTTTTAGTAGGCTCTTGGGAGGAGCCAGCTGGGCCGAGCT
CCACCGTCATGACCCAACTGGAGTCGGACTTGGAACCGGCGCGCTTCTGCCAGACGCCGATGTGGGAGCTGGCCGTGTCAAGACGG
ATGCAGGTGAGGGAAGGCGAAGGAGACTTGCAGCATTTCCTCAGTTTGGCGCTGAGGATAGAAGAGAGTGGCGAAGAGGAGGATGA
AATATCTGTTTTGCCCTCCGATGTGTCTCCTGTGTTGTTGTTGTTGTTGAGGGGGAAGTTAGTCTTGGCGTTGCGGCCGCTCATTA
AAACAGCCGCCTCGTCGTAGGCTCTTGCTGCCTCCTCTGCCGTCTCAAACGTCCCAAGCCAAATTCTCCGTTTCAAGAGAGGATGA
CGAATCTCAGCGACCCAAGAACCCCAATGGCGTTGCCTGACACCTCTGAACTTCTTCGTCTGTACCATTCTTACTTACTCTGAGTT
CTTTTGTCAGAGAGAAAACATGAATTCCCTTATTACATTTGACGTCCTTACTAGTCTAT
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GenBank top hits (Blast detail) | Score | e value |
ABB55257 AP2 transcription factor [Brassica carinata] | 840 | 7e-088 |
XP_002890099 hypothetical protein ARALYDRAFT_471733 [Arabidopsis lyrata subsp. lyrata] | 831 | 8e-087 |
NP_172988 ethylene-responsive transcription factor WIN1 [Arabidopsis thaliana] | 824 | 5e-086 |
AAM62938 putative ethylene responsive element [Arabidopsis thaliana] | 817 | 3e-085 |
ABB55256 AP2 transcription factor [Brassica juncea] | 709 | 1e-072 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9XI33 Ethylene-responsive transcription factor WIN1 | 824 | 2e-087 |
Q9LFN7 Ethylene-responsive transcription factor SHINE 2 | 523 | 2e-052 |
Q3E958 Ethylene-responsive transcription factor SHINE 3 | 479 | 2e-047 |
Q94AW5 Ethylene-responsive transcription factor ERF003 | 278 | 5e-024 |
P16146 Protein PPLZ02 | 255 | 2e-021 |
TrEMBL top hits (Blast detail) | Score | e value |
A1X3G9 AP2 transcription factor | 840 | 5e-088 |
A1X3G8 AP2 transcription factor | 709 | 8e-073 |
B9RV55 DNA binding protein, putative | 647 | 1e-065 |
B6T5Z6 Ethylene responsive element | 622 | 9e-063 |
C5XXV9 Putative uncharacterized protein Sb04g006970 | 615 | 6e-062 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT1G15360.1 SHN1 (SHINE 1); DNA binding / sequence-specific DNA binding / transcription factor | 825 | 2e-088 |
AT5G11190.1 SHN3 (shine3); DNA binding / transcription factor | 523 | 2e-053 |
AT5G25390.2 SHN2 (shine2); DNA binding / transcription factor | 479 | 2e-048 |
AT5G25190.1 ethylene-responsive element-binding protein, putative | 278 | 4e-025 |
AT1G78080.1 RAP2.4 (related to AP2 4); DNA binding / transcription factor | 242 | 6e-021 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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