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Information for unigene UN10598
| FASTA Sequence |
| Unigene ID: UN10598 | Length: 833 |
SSR | | AGTTCACTTCTGGATTTTTGTTACAAATACTAATACTTTATCGGACATAAAACGATATATAAAACAACATATAACTATCACATTGT
AAATATAAACACGATACATAGCATATATGGGTATATATAATTAATAATTATGGCGGTAAATCAGCAATAAAAATAGGTATATATAA
GCAAATAATATTTAGTTTGTATTGAGAAGCTCCTCTATCATTTGCAAAGCAGCCTTCTCTTCTTCGTCCATTGCTCCTTCTCCTCC
TCCGCCGCCAACTTCAGTGGCTGGACCAACATCATCCTGTGAAGCATTTTTAGTAGGCTCTTGGGAGGAGCCAGCTGGGCCGAGCT
CCACCGTCATGACCCAACTGGAGTCGGACTTGGAACCGGCGCGCTTCTGCCAGACGCCGATGTGGGAGCTGGCCGTGTCAAGACGG
ATGCAGGTGAGGGAAGGCGAAGGAGACTTGCAGCATTTCCTCAGTTTGGCGCTGAGGATAGAAGAGAGTGGCGAAGAGGAGGATGA
AATATCTGTTTTGCCCTCCGATGTGTCTCCTGTGTTGTTGTTGTTGTTGAGGGGGAAGTTAGTCTTGGCGTTGCGGCCGCTCATTA
AAACAGCCGCCTCGTCGTAGGCTCTTGCTGCCTCCTCTGCCGTCTCAAACGTCCCAAGCCAAATTCTCCGTTTCAAGAGAGGATGA
CGAATCTCAGCGACCCAAGAACCCCAATGGCGTTGCCTGACACCTCTGAACTTCTTCGTCTGTACCATTCTTACTTACTCTGAGTT
CTTTTGTCAGAGAGAAAACATGAATTCCCTTATTACATTTGACGTCCTTACTAGTCTAT
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| GenBank top hits (Blast detail) | Score | e value |
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| ABB55257 AP2 transcription factor [Brassica carinata] | 840 | 7e-088 |
| XP_002890099 hypothetical protein ARALYDRAFT_471733 [Arabidopsis lyrata subsp. lyrata] | 831 | 8e-087 |
| NP_172988 ethylene-responsive transcription factor WIN1 [Arabidopsis thaliana] | 824 | 5e-086 |
| AAM62938 putative ethylene responsive element [Arabidopsis thaliana] | 817 | 3e-085 |
| ABB55256 AP2 transcription factor [Brassica juncea] | 709 | 1e-072 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XI33 Ethylene-responsive transcription factor WIN1 | 824 | 2e-087 |
| Q9LFN7 Ethylene-responsive transcription factor SHINE 2 | 523 | 2e-052 |
| Q3E958 Ethylene-responsive transcription factor SHINE 3 | 479 | 2e-047 |
| Q94AW5 Ethylene-responsive transcription factor ERF003 | 278 | 5e-024 |
| P16146 Protein PPLZ02 | 255 | 2e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A1X3G9 AP2 transcription factor | 840 | 5e-088 |
| A1X3G8 AP2 transcription factor | 709 | 8e-073 |
| B9RV55 DNA binding protein, putative | 647 | 1e-065 |
| B6T5Z6 Ethylene responsive element | 622 | 9e-063 |
| C5XXV9 Putative uncharacterized protein Sb04g006970 | 615 | 6e-062 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G15360.1 SHN1 (SHINE 1); DNA binding / sequence-specific DNA binding / transcription factor | 825 | 2e-088 |
| AT5G11190.1 SHN3 (shine3); DNA binding / transcription factor | 523 | 2e-053 |
| AT5G25390.2 SHN2 (shine2); DNA binding / transcription factor | 479 | 2e-048 |
| AT5G25190.1 ethylene-responsive element-binding protein, putative | 278 | 4e-025 |
| AT1G78080.1 RAP2.4 (related to AP2 4); DNA binding / transcription factor | 242 | 6e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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