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Information for unigene UN10613

FASTA Sequence
Unigene ID: UN10613Length: 1041 SSR 
GGGAAGAAAACAAAACACAGAGAGCTAGAGAGAGAGAGAGAATTAGAACAATGGCGGCTAATTCAATCTGTTCGTCTTTATCAGTG
CATTCCATGGCGAACAAGAAGCCTTCACCTTCTGCAGCAAGAACCATAACCTCAAAGAAGGGCACAACAAGTGGACAGGTGAAGCT
GCTGACAAGAGTCGAGCAGCTCAAGCTTCTGACCAAAGCCGAAAAGGCTGGTCTTTTATCCTTAGCCGAGAAATCAGGTTTCTCTC
TCTCCACCATCGAGCGTCTCGGACTGCTCACCAAAGCCGAGGAGTTCGGCGTTTTGTCCGCCGCCACGAACCCCGAAACGCCTGGA
ACGCTGTTCACCCTGAGCATCGGTTTACTCCTACTCGGACCGGTTTTCGTCTACTTGGTCCCTGAAGATTACTCTTGGCAAGTGGT
GGTTCAGCTCGTCGTGGCTCTCGTCTCTGTCCTCGGTGGCTCTGCTGCTTTTGCTGCTTCTGGTTTTGTCTCCAATTTGCAGAAAT
CTGATTGACCCCGGTTATTTCGATTTTTGTTTAAACCGGGTTGGGTTTTTGTATCGGATTCGCTCGTGTATTTGAATCTAAATTGC
TTTAAGCTCATTTCAATGTTTATGTAAATGTTTATGAGGCCCATTAATAATTAAGCCTGTTCCTAGGCCCATAAACTCTTTCGCCT
AAGCCAAACCGGTAATTGTTTAACTAAGAGTCTAAGAGGTTAAATCTCGGTTTAATATCGAACCAATCCAGATTTGTAGGTTTTTC
TTGTGGTCTCTGATTTGCTGATGGGCGAAGGACTGCGTTTGATATTTTCTCTACCGACAAAAGATTCTCCATTGTTTGCTTTATCT
AATAAGGTTTGTAGTAGAGCATTGTGTATATACAAAAAACACTTTATTTTCCTTCACAAGAACCAGACTCTTGCTCAAGTTATATT
CCATATGTTTACGCATATATATGATGATGATGACAAACTCATTATTGCTTCAAGTCTTTGGTTTTATTAGAAACGGTTGCTTATGT
AATAACACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_196422 uncharacterized protein [Arabidopsis thaliana]6832e-069
AAL47451 AT5g08050/F13G24_250 [Arabidopsis thaliana]6795e-069
XP_002871303 hypothetical protein ARALYDRAFT_487637 [Arabidopsis lyrata subsp. lyrata]6761e-068
XP_002514644 conserved hypothetical protein [Ricinus communis]4681e-044
XP_002328665 predicted protein [Populus trichocarpa]4502e-042

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9SD79 Putative uncharacterized protein F13G24.2506831e-069
Q8VYV1 AT5g08050/F13G24_2506793e-069
B9RLM5 Putative uncharacterized protein4681e-044
A9PGF4 Predicted protein4501e-042
C6T175 Putative uncharacterized protein4348e-041

Arabidopsis top hits (Blast detail)Scoree value
AT5G08050.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1118 (InterPro:IPR009500), Uncharacterised conserved protein UCP022207 (InterPro:IPR016801); Has 41 Blast hits to 41 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).6845e-072
AT1G74730.1 unknown protein1739e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
611  69%
 
92  13%
 
121  6%
 
102  13%

Unigene MembersMember information