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Information for unigene UN10616

FASTA Sequence
Unigene ID: UN10616Length: 805  SNP
ATCAAGAAATCAAAATATTAAAGACACTTCCCAAGCAACGGAAGTGAACATATACCAATAGAAGAAACTTACACCCATCACAAGAG
TTCCCATCACATGGAGTCATCATCATCATCTAATTTCTCATAATATTATATCAAGAAAATACAAATATATATCTCCCATAACCAAA
TAGAAAAAACAACAGACCATCATGACACTGATTAAAGATGGGTCTCTCTAAACCTCATCTTCATCAACCTGATACTTCTTAATCAA
CTCAGAGCAAAACACATCAGAAACATCTTTCTCAAACCCCATGTTGTTAGCGTGCCTGATCTGCGACGCAATGCCATTGTAGTGGT
TCAATATCACACGCGACTGTTCACGCCCCCTCGAGATTTTAGAACAACCCTTGTCTGAGCTTTTGACAAGCATAACGTCGCACATC
TCGTCTTTATGGTCCTCGTGGACAACGAACATGTACTTTCCCTTCCTGTTTGATACAGCTACGTCTGTGTATAACTCTTTCATTGT
CTTCCTGTCTCTGCACGAAAGCTTCACCGTCGCACCGGGGACGGGGTAGGAGGATTCAGCAGTCTCGAAGCCGAACTTGCAAGTGT
CACAGTAAGTGATACCTTGAACCACCAACGTGTTCTTACCGATACGTGGCACCTTCGCCGCCATGGCTATCGCCGGCAAGATACAG
AGAACCATCAGCATCGCTAGTTTCGCCATTTTTGCCAAAGAGAAGACGTACAAGTGAGGGAGAGATGAGAGGAGGACGCACAGAGA
TATTAGTGAAATTTTAAGACAGCGAATCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_177927 pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]6963e-071
XP_002889170 pollen ole e 1 allergen and extensin family protein [Arabidopsis lyrata subsp. lyrata]6759e-069
AAN60344 unknown [Arabidopsis thaliana]6329e-064
AAF17689 F28K19.26 [Arabidopsis thaliana]6264e-063
XP_002887714 pollen ole e 1 allergen and extensin family protein [Arabidopsis lyrata subsp. lyrata]6042e-060

Swiss-Prot top hits (Blast detail)Scoree value
Q8LGR0 Pollen allergen Che a 12373e-019
P33050 Pollen-specific protein C132354e-019
O49813 Olee1-like protein2292e-018
P13447 Anther-specific protein LAT522274e-018
Q7M1X5 Major pollen allergen Lol p 112132e-016

TrEMBL top hits (Blast detail)Scoree value
Q8LD45 Allergen, putative6962e-071
Q8H789 Putative uncharacterized protein (Fragment)6326e-064
Q9SGZ6 F28K19.266263e-063
Q42043 Pollen specific protein (Fragment)5117e-050
A9P9E0 Putative uncharacterized protein3881e-035

Arabidopsis top hits (Blast detail)Scoree value
AT1G78040.1 pollen Ole e 1 allergen and extensin family protein6961e-073
AT1G78040.2 pollen Ole e 1 allergen and extensin family protein6961e-073
AT4G08685.1 SAH73824e-037
AT5G10130.1 pollen Ole e 1 allergen and extensin family protein2722e-024
AT4G18596.1 pollen Ole e 1 allergen and extensin family protein2051e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
117  30%
 
127  30%
 
83  13%
 
106  26%

Unigene MembersMember information