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Information for unigene UN10629
| FASTA Sequence |
| Unigene ID: UN10629 | Length: 1900 |
SSR | | GGACCTAATTAATCGTCACATCATCCAATTGAATTAGAGAGGGAAAGAGAGAGAGAGAAAAGGTTTAGAGAGAGAAGGGGGATGGG
AAACTCGTTTGGTTGTTCGGCGTCAGGGGAGAGATTAGTATCAGCGGCGAGAGATGGTGATTACGTGGAAGCGAAGATGCTGCTAG
ATTGCAATCCTTGCCTCGCCAAGTACTCTACCTTCGGTGGTCTCAATTCTCCTTTGCATTTCGCCGCCGCTAAAGCTCACAACGAG
ATCGTGGGGTTGTTGCTTGAGAAAGGAGCTGATGTGAACTCCAGAAACTATTGCGGCCAGACGGCATTGATGCAAGCATGTAGATA
CGGACACTGGGAAGTTGTGCAAACTCTTCTTCTCTTTCGTTGCAATGTTACAAGAGCTGATTATTTAGCTGGAAGAACGGCGCTTC
ATTTCGCTGCTGTCAACGGTCACGCCAGGTGTATTAGACTCGTTTTGGCTGACTTTGTACCCAGTGAGCAACTTAACCCTCTTCCT
GACTCTGGTGTCTTGGTCACACCTAGAAACAAATCCGACCAAAGCGCATTGTCTAAATTTGTGAATAAGGCGGCTGACGGTGGAAT
CACAGCTCTTCACATGGCTGCCTTAAACGGATTGTTTGACTGCGTGCAGCTTTTACTTGATCTTGAAGCCAATGTTTCCGCTGTCA
CTTTTCATTATGGAACATCAATGGATATGATTGGAGCAGGAAGCACGCCTTTGCACTATGCCGCTTGTGGTGGGAATCTTAAATGT
TGTCAGATTCTCCTTGCAAGAGGTGCAAGAAAGATGACATTGAACTGCAATGGGTGGCTACCTATTGACATATCAAGGATGTGGAG
TCGTCATTGGTTAGAACCTTTGCTTTCACCAAGTTCTGATGTCGTCATTCCACTCTTCCCTCGTTCCAACTACTTATCATTGCCTC
TTTTAAGTATTCTCAACATCGCTAGAGAGTTCGGGTTGCAGGCAGCAACCATCACAGATGAGGTTGATATCTGTGCCGTTTGCCTG
GAGAGAACCTGCACTGTTGCTGCTGAAGGTTGTGAGCATCAGCTATGTGTGAGATGCGCGTTATATCTTTGCTCCTCGAGCAATGT
CCCTTCGGTGACAGTTGATCCTCCCGGTTCAATCCCCTGTCCTCTTTGCAGACACGGAATAGTCTCCTTTAAACGTCTCTCAACCT
CCCTGACCAGAGAACTGAAGCTACCTATGTCGCTTGGTTTCTGTGCGCCGTGTATGCTCCACACTGGAGGAGACGCAAGAGATCAA
TCCTCACCGACCACTGAACAGCAACAGCGTAGCAGCAGTAAGACTCGAGCGGCCTCGGTTTCGTCTGATATGTTCTGTCCCGGTGA
CGTGCAGTCCGTTCCCTTCAGTCAACATCCCAATGTGCACCTGCAGCGATGGAACATGTCCAAACTTTGAGACGCATTGAGGAGAG
AGACATAGTGAAGAAGAACACGAGGACGAGACTTCTCCTCCTCCACGGGCAACGAATGAGCAGGAGAAGGTAGATGAAGGGTAGAG
ACTTGGGAAAACAACAACTTGCTCGAGTATGTTTTGGGGAAGAAGAAGCTGTAGCAGAGAGAACCAATGCAACTCAGAGATCAATG
CCTGATCACAAACATTTCTATGTACAGCGAGTGAGAAAGGGGATTGATGTATACCTTGTTTATTTCCTTTTTAATTGAGATGAGAG
CCTTTCTTGTATTTGTTTCTACTTTTGAGAGGGTTCAGATATAAAATTATGGTGGAAGATTTGTAATTATCATCATAATGATGGGG
TCATTTGCAAAATCTTTGTACTTTATTATTGTGATGGATGTCTTTGTTTGTACCATGTGTTGAAACATTGCGACTATCTTATGATT
TTCAACTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196344 E3 ubiquitin-protein ligase XBAT33 [Arabidopsis thaliana] | 2086 | 8e-232 |
| CAB87283 putative protein [Arabidopsis thaliana] | 2014 | 2e-223 |
| XP_002278915 PREDICTED: hypothetical protein [Vitis vinifera] | 1776 | 7e-196 |
| XP_002510819 ankyrin repeat-containing protein, putative [Ricinus communis] | 1775 | 9e-196 |
| XP_002322458 predicted protein [Populus trichocarpa] | 1740 | 1e-191 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q4FE45 E3 ubiquitin-protein ligase XBAT33 | 2086 | 3e-233 |
| Q6KAE5 Probable E3 ubiquitin-protein ligase XBOS32 | 1184 | 1e-128 |
| Q6NLQ8 E3 ubiquitin-protein ligase XBAT32 | 1115 | 1e-120 |
| Q7EZ44 Probable E3 ubiquitin-protein ligase XBOS35 | 1078 | 2e-116 |
| Q337A0 Probable E3 ubiquitin-protein ligase XBOS33 | 882 | 1e-093 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9R9E4 Ankyrin repeat-containing protein, putative | 1775 | 6e-196 |
| B9ID59 Predicted protein | 1740 | 7e-192 |
| B9I4B1 Predicted protein | 1728 | 2e-190 |
| A9S844 Predicted protein (Fragment) | 1324 | 1e-143 |
| A9RJI4 Predicted protein (Fragment) | 1311 | 4e-142 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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