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Information for unigene UN10673
| FASTA Sequence |
| Unigene ID: UN10673 | Length: 969 |
SSR | | GGACAGACAAACCCTTTCCTCCTCCCATTTCATTGCAGAGACAGAGAGAGAGAGATTCAGACACAAAAAATGCTTCTCAAATCAGC
TTCTGCTTTCTCCCTCGTGAACATCCATGGAGTCGAGAAGGACATCTCTCCTCTCTCCTCCTCCTCGTCCTCGAGTCTTCCCGTTT
CTTCGGGAAAACCACGAAACCTCTCCTTCTCTGTGTCTGCCTCAAAGGCTACCACCACCACGACGCAGACCCTAAGCGGCGTCGTT
TTCGAGCCGTTTGAGGAGGTGAAGAAGGAGCTCGATCTCGTCCCTTCGAGCCCACAGCTCTCTCTTGCTCGCCATCTGTACTCTCC
CGAGTGCGAAGCCGCCGTGAATGAGCAGATCAATGTGGAGTACAACGTGTCTTACGTGTATCACGCCTTGTACGCTTACTTTGATC
GTGATAACGTTGCTCTCAAAGGTCTTGCCAAGTTTTTCAAGGAGTCGAGTGTGGAAGAACGAGACCACGCTGAGATGTTGATGGAG
TATCAGAACAAACGTGGTGGGAGAGTTAAGTTACAGCCTATGGTGATGCCTCAGTCTGAGTTTGATCACGCTGAGAAGGGAGATGC
TCTCTATGCCATGGAGCTGGCTCTATCGTTGGAGAAGCTGGTCAATGAAAAGCTCCTCAACGTGCACAGTGTGGCTTCGAAGAACG
ATGATGTCCAGTTGGCAGATTTCATTGAGAGCGAGTTTTTGAACGAACAGGTTGAAGCGATTAAGAAAATCTCTGAATATGTGGCT
CAGCTCAGAAGACTCGGCAAAGGGCATGGAACATGGCACTTCGATCAAGAGCTTCTGGAAGCTGCTGCTGCTTAATCTCTTCTTAT
AAAACTAATGCTGCTTAATCTGTTTTGGTTGTAATCTCTCTTATAAACTCTTGTTCCTTGATCTGTTTTGGTTCTTGACTATTAAG
CAGTTAGTTTTGTTTACACCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34006 unnamed protein product [Thellungiella halophila] | 1181 | 3e-127 |
| NP_001146869 ferritin-1 [Zea mays] | 1180 | 3e-127 |
| NP_191168 ferritin 3 [Arabidopsis thaliana] | 1158 | 1e-124 |
| ABB22752 ferritin [Chorispora bungeana] | 1118 | 5e-120 |
| XP_002878066 ATFER3 [Arabidopsis lyrata subsp. lyrata] | 1077 | 3e-115 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LYN2 Ferritin-3, chloroplastic | 1158 | 5e-126 |
| Q9S756 Ferritin-4, chloroplastic | 1014 | 3e-109 |
| Q8H1T3 Ferritin-2, chloroplastic | 903 | 2e-096 |
| Q948P6 Ferritin-3, chloroplastic | 894 | 2e-095 |
| Q41709 Ferritin-2, chloroplastic | 851 | 2e-090 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G56090.1 ATFER3 (ferritin 3); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 1158 | 5e-127 |
| AT2G40300.1 ATFER4 (ferritin 4); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 1014 | 2e-110 |
| AT3G11050.1 ATFER2 (ferritin 2); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 844 | 1e-090 |
| AT5G01600.1 ATFER1; ferric iron binding / iron ion binding | 785 | 9e-084 |
| AT3G61010.1 glycosyl hydrolase family protein 85 | 189 | 1e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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