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Information for unigene UN10688

FASTA Sequence
Unigene ID: UN10688Length: 1136 SSR 
GGGGGACAGGGAGAGAGAGAGCTTCCACCTACCATCCCTCCACCTCCGCCTCCTCCTTCTAGACCCAGTCTCAACGGCAACACAGG
TCATCATATCCCTCCACCACCTTCTAGACCCAGTCTCAACGGCAACACCAGTCATCACCATCTCCCTCCTCCGCCTTCAAGACCCA
GTCTCAACGGCAACACCAGTCATCACCATCTCCCTCCTCCACCTTCTAGACCCAGTCTCAACGGCGGCAACGCCGTTCATCAAGTC
CATCCTCCTCCTTCTCACACCGCGAGGCATCAGCAACCGTATTACCGTAGCTACTCCTCCTCCTCCTCAGCCTCATTCAAGGGATG
CTGCTGCTGCCTCTTCCTCCTCTTCTCTTTCCTAGCCCTCCTAGTACTCGCAATAGTACTGATCGTGATACTAGCGGTGAAGCCGA
AGAAACCACAGTTCGATCTACAGCAAGTGGCGGTAATGAACATGGGAATCACCTCCATGGATAACCCCAACCCCAGCGTCTTAGAT
CCAACCACCGCATCCCTCTCCTTCACAATCCGGATGCTGTTCACCGCCGGGAACCCGAACAAAGTCGGGATCAGGTACGGTGAGTC
CAGCTTCACGGTGCTGTACAAAGGCTTGCCACTTGGGAGAGCGACGGTGGCGGGTTTCTACCAGGAAGCGCACAGTACGAGGAACG
TGGAGGCGACGATTGCTGTGGATAGAGTTAATCTTATGCAAGGCAACGCCGCTGAACTGGTCAGAGACGCTTCGTTGAATGATCGA
GTCGAGCTTACGGTTCGTGGGGACGTTAGCGCTAAGATCCGAGTGATGAACTTCGATTCCCCAGGCGTTCAGGTATCGGTGAATTG
CGGGATAGGCATTAGTCCGAGGAAACATGCTCTGATTTACAAGCAATGTGGTTTTGATGGCCTTAGCGTCTAATTTCAAACTGTAA
CATATAAATTCTACTGATCACACTCCCAAACTGTGTGGAGGAGTTGCGAACAAAAAAAAGTTAGAAGTTCCAAAGCCAAAAGTGGT
AAAGAAACGGAACAGAGGATCCATCCTGGAAGTTTTGTGTGTGTTTTGTTTCCTTTGTACAAGCAATATTTAGAAATGCAACAATG
TTGTTTACTAAAGTCACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565250 late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana]9564e-101
AAK55661 At2g01080/F23H14.5 [Arabidopsis thaliana]9564e-101
XP_002875058 hypothetical protein ARALYDRAFT_484014 [Arabidopsis lyrata subsp. lyrata]9555e-101
XP_002527937 conserved hypothetical protein [Ricinus communis]8373e-087
XP_002303177 predicted protein [Populus trichocarpa]8274e-086

Swiss-Prot top hits (Blast detail)Scoree value
Q0GNC1 Inverted formin-21561e-009
Q84ZL0 Formin-like protein 51523e-009
Q6MWG9 Formin-like protein 181424e-008
Q7G6K7 Formin-like protein 31372e-007
Q6K8Z4 Formin-like protein 71301e-006

TrEMBL top hits (Blast detail)Scoree value
Q93W01 At2g01080/F23H14.59563e-101
Q9SJV8 Expressed protein9563e-101
B9SPL8 Putative uncharacterized protein8372e-087
B9GZR6 Predicted protein8273e-086
B9GF80 Predicted protein (Fragment)7556e-078

Arabidopsis top hits (Blast detail)Scoree value
AT2G01080.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Harpin-induced 1 (InterPro:IPR010847); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54200.1); Has 388 Blast hits to 387 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 386; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).9571e-103
AT1G31810.1 actin binding1326e-008
AT1G54215.1 proline-rich family protein1301e-007
AT1G61080.1 proline-rich family protein1282e-007
AT1G24150.1 FH4 (FORMIN HOMOLOGUE 4); actin binding / protein binding1263e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  67%
 
201  33%

Unigene MembersMember information