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Information for unigene UN10709

FASTA Sequence
Unigene ID: UN10709Length: 1114 SSR 
GAGCTAATGGACATGGATTGGTCCTGATGAAGGTGAGGGAGTGAGTTATGTCTTAAAGATTCTTCGAAGCTAACACAGACAAAAAC
TGTAATAATAAAAATTTCGAAGCTGCCCATGGCCATGGCCTCTCAGATTATAGCATCTTCTTCACCAACGATTACAAATAGGTCTC
ACCTTCTCCCTTGTTACAAAACTTCGAAACCTTATCTCTCTTCATGTTTGGGTTCTTCTCGTTACTCTCCTTACATTGGTCTAAAG
CATATGGGCATCTCAATCTCGCCGAAATCTTCAAACCCAGGTCTCGAATTTCTCTATATCATCACAAAGTTGATTTCTTTTTTGTG
ATAATATGTTCGGTTTGTTGTGCAGAGAGAAAGAGAAGATGTAGTAAAGGTATGGTGATTCGTGCGTCTCTGTTTGGCGTTGGAGC
ACCTGAGGCTTTGGTAATTGGAGTTGTTGCTTTGCTCGTCTTTGGTCCTAAAGGCCTTGCAGAGGTTGCTCGAACTCTTGGGAAAA
CACTGCGTACATTTCAGCCCACTATTAGAGAGCTACAGGATGTTTCAAGAGATTTCAAAAGCACCCTTGAGCGTGAGATTGGCCTT
GATGAAATCTCAACTCCAAATGTGTACAACCAGAACAGAATGAACACTCCACCACCACCACCAACATCAGTTCCTAGCACTGAAGA
TCCTGTGACTGCTGCAAGTGGTCCGAATGATGTTCAATCACCAAAAGCTTACACAACCGAGGATTACCTCAAGATTACAGAAGAGC
AGCTCAAAGCTTTGTCTCCAGGTGAAGCCGGCGATCAAACTCAGACTCAACAAACATCTTCTACCGAAGAAAGCCAACCCAAAGGT
ACATCAACGGCCACATCCCCTCCAAGACAAGATTGAAAACACCAAAAACTGACTTCGGGATGGGTATTTTTTGATCTGCCAAAAGA
AATTAAGCTATTAGCTCTCTCCCAGGACATTTTTCTCAAAGCATTATGTGCAATCTTTAATATGGATTCAGAAAATGACTCATTTG
TGTATTTATTTTCCAATTATTGCCTTCTTAATGATAAATGACGTAGCACAGAGATGTTGGGTCAATTAAAGGCCATTCGGGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864174 HCF106 [Arabidopsis lyrata subsp. lyrata]6723e-068
NP_200057 Bacterial sec-independent translocation protein mttA/Hcf106 [Arabidopsis thaliana]6492e-065
ABK94883 unknown [Populus trichocarpa]4771e-045
XP_002321929 predicted protein [Populus trichocarpa]4771e-045
AAK93949 HCF106 [Pisum sativum]4601e-043

Swiss-Prot top hits (Blast detail)Scoree value
Q31RR1 Sec-independent protein translocase protein tatA/E homolog1578e-010
Q5N2J3 Sec-independent protein translocase protein tatA/E homolog1578e-010
Q8DJ44 Sec-independent protein translocase protein tatA/E homolog1578e-010
Q110N2 Sec-independent protein translocase protein tatA/E homolog1326e-007
A3PB74 Sec-independent protein translocase protein tatA/E homolog1282e-006

TrEMBL top hits (Blast detail)Scoree value
Q9XH75 HCF1066491e-065
A9PET0 Putative uncharacterized protein4771e-045
B9IDB3 Predicted protein4771e-045
Q94G16 HCF1064609e-044
C6TE98 Putative uncharacterized protein4582e-043

Arabidopsis top hits (Blast detail)Scoree value
AT5G52440.1 HCF106; proton motive force dependent protein transmembrane transporter6496e-068
AT5G28750.1 thylakoid assembly protein, putative1272e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  57%
 
63  43%

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