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Information for unigene UN10712
| FASTA Sequence |
| Unigene ID: UN10712 | Length: 1226 |
SSR | | GGGAGAGAGAGAGAGTGTGTGTCTGTGAGCAAGAACTAGAGAGAGCGAGTTGGATCTGAGTGAATTGGAGATGGCTGCGAACATAG
GGATAATGGATTCAGCATATTTCGTAGGGAGATCGGAGATTCTCGCGTGGATCAACTCCGCTCTGCATCTAAATCTCTCCAAAGTC
GAAGAGGCTTGTTCAGGCGCGGTTCACTGTCAGCTCATGGATTCGGTTCACCCTGGAGCTGTGCCGATGCACAAGGTTAATTTCGA
TGCCAAGAGTGAGTACGAGATGATTCAGAACTACAAGGTGCTTCAGGACGTGTTTAACAAGCTCAAGCTCACTAAGCACATTGAGG
TGAGCAAACTCGTTAAAGGTAGACCACTTGATAACTTGGAGTTCATGCAGTGGATGAAGAAGTACTGCGATTCTGTTAATGGTGGC
CAGCTTCACAGCTATCACGCACTTGAGAGAAGAGAGGGCAGCAAAGGAGGAAAAGAAGCAACCAAGAGAGCTGCAGCTACACAACA
ATCTGGCAAGAGTTCTTCTTCTTCTTCAGCTGCTGCACCTAGACCTTCATCTTCAAATGGTACCCGTAAACACGATCCACCATCCT
CCAACACTGGGAATCATCATCACTCTTCAAGAGCCCCCTCCTCTAAACAATCTAAACCAGCTCCTCCTGCTTATGATGAAAAGATC
ACAGAACTGAAACTCTACATCGACAGTTTAGAGAAAGAGAGAGACTTCTACTTCTCAAAACTAAGAGATGTAGAGATTCTCTGTCA
GAATCCAGACACACAACACTTACCTCTTGTTGGTTCCATAACAAGAATCCTCTACGCAGCAGATGGAGAAGAAGTTGGAGCAGCAG
CAGCAGCAGAGACACAGACCTTAAGCCCTATTGCTGAAGGATCAGAAGAGAGAAGGAAGAGTGTGATAGAGTCGCAGAAGAGGAAA
CTCATAGTGAATCACGACGTGGAGGCTGCAGCGCGTGCATCACTCTCTCCAAGGCAACGCCTCTCTGATTCTTCTGATGTCAAATG
CAGTGGCTCATCTCCTCTTTTGGCCTGCTGAAGTTCCTTGCTACCCATACCTCTGTTTCTTATGAACGTTGCTCTCTATGTTCGAA
AATTCTCTGTTACTTCATATAAACCTATTCTTACTATGTGCTTAAATGAAAATATCATTCATATGATGTTTTGTGATCGTTATGGT
ATAATAATAAATATGTTTTGAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002865013 ATEB1C [Arabidopsis lyrata subsp. lyrata] | 1443 | 2e-157 |
| NP_201528 end binding protein 1C [Arabidopsis thaliana] | 1442 | 2e-157 |
| BAH58382 AtEB1c-like protein [Nicotiana tabacum] | 988 | 9e-105 |
| NP_001064972 Os10g0498900 [Oryza sativa Japonica Group] | 964 | 6e-102 |
| EAY79090 hypothetical protein OsI_34197 [Oryza sativa Indica Group] | 958 | 3e-101 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q3ZBD9 Microtubule-associated protein RP/EB family member 1 | 447 | 2e-043 |
| Q5R7Z5 Microtubule-associated protein RP/EB family member 1 | 447 | 2e-043 |
| Q15691 Microtubule-associated protein RP/EB family member 1 | 444 | 5e-043 |
| Q9UPY8 Microtubule-associated protein RP/EB family member 3 | 441 | 1e-042 |
| Q6PER3 Microtubule-associated protein RP/EB family member 3 | 440 | 1e-042 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FGQ6 At5g67270 | 1442 | 1e-157 |
| C4B8D7 AtEB1c-like protein | 988 | 6e-105 |
| A2Z907 Putative uncharacterized protein | 964 | 4e-102 |
| Q8LNH6 Microtubule-associated EB1 family protein, putative, expressed | 964 | 4e-102 |
| A2Z906 Putative uncharacterized protein | 958 | 2e-101 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G67270.1 ATEB1C (microtubule end binding protein 1); microtubule binding | 1452 | 5e-161 |
| AT3G47690.1 ATEB1A; microtubule binding | 560 | 1e-057 |
| AT5G62500.1 ATEB1B (END BINDING PROTEIN 1B); microtubule binding | 543 | 1e-055 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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