Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN10743

FASTA Sequence
Unigene ID: UN10743Length: 864 SSR 
GCTTCAGTGATGATTGTCGATAACTCCACAAAAACACGGCTTAAACTCGCGCCCTCGATTGAAGGTGACGGACAACAGCTTAAGTG
GTTTTGTGATGCATGTAAAGGGATTCCACAGCCAGCGCATCCCCCAGTGTTTCTCCAAACTCCACCGTCTGCGCCACCACTTCATC
CTGATATGGCCGACAGTATCAATCACCATTCCATTGGTGAAGCAAGCTCCTCAACGGCACCCCCTCCTCCTCCTCCTCACATTCCA
CCTCCCTCAGGAAAAGCGACGCCATGAAAGTGTTATTGTCCACGAACCTTCACCTTCAGCTCCTCCGTTAGCAGATGAGGATATAG
AAACCGTAGAGGAAGGCCCTGTTCATTACCCAACAATCGATTCAACACCTGTCGATGTCCCATCTCCTTCTCATCTACCAGCTTCA
ATAGATGGTGAAAAGAAAGATGACGGAAGCTCTGGACAGTGTTCGATATGTCTTGACGCTCCATTTGAAGCTGTTTGTGTTCCGTG
TGGACATGTTGCGGGATGCATGTCTTGCTTAACCGAGATCAAAGCCAAGAATTGGGGATGTCCGGTTTGTCGTGCCAAGATCGATC
AGATCATTAAACTTTACCGTGTTTGAAATAGACAGGTACTACTACTTATACTCCATGGGGAGTATCTCTCTCCTTCATTGTGTTGT
GGGATTAAAGTTTCTCAACCATTGAAACTATCTCTCTGTTAAGCTTGTGTTTTCTTGACAAAACGTTTTATACTTGGAATTTCAAC
ACAGTACCTATGTTTTGTATATATGGTTTTTGACGAAGGAAGAATGTTAAAAGTATTCATACAATATATATATGTGTATTTCAATT
TATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAA95741 unnamed protein product [Arabidopsis thaliana]4974e-048
NP_850628 putative E3 ubiquitin-protein ligase XBAT35 [Arabidopsis thaliana]4974e-048
AAM65682 unknown [Arabidopsis thaliana]4974e-048
NP_566724 putative E3 ubiquitin-protein ligase XBAT35 [Arabidopsis thaliana]4974e-048
XP_002883418 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]4974e-048

Swiss-Prot top hits (Blast detail)Scoree value
Q4FE47 Putative E3 ubiquitin-protein ligase XBAT354972e-049
Q7XI08 Probable E3 ubiquitin-protein ligase XBOS342491e-020
Q9FPH0 Putative E3 ubiquitin-protein ligase XBAT342411e-019
A1L3F4 RNA-binding protein MEX3B1235e-006

TrEMBL top hits (Blast detail)Scoree value
B9HKH1 Predicted protein (Fragment)3721e-033
A5BSQ6 Putative uncharacterized protein3683e-033
B9NBW1 Predicted protein (Fragment)3665e-033
B9T5F0 S-adenosylmethionine-dependent methyltransferase, putative3621e-032
B9NG74 Predicted protein3541e-031

Arabidopsis top hits (Blast detail)Scoree value
AT3G23280.1 zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein4981e-050
AT3G23280.2 zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein4981e-050
AT4G14365.1 zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein2427e-021
AT1G63900.1 zinc finger (C3HC4-type RING finger) family protein1396e-009
AT2G38195.2 protein binding / zinc ion binding1371e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  50%
 
91  50%

Unigene MembersMember information