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Information for unigene UN10750
| FASTA Sequence |
| Unigene ID: UN10750 | Length: 1772 |
SSR | | GAAAGATAAACACTTTCCGACTCGTGAGAGAAAAAGATTGGAACTTTCATTTCATGGGTTGTTGTCAATCCCTGTGTCCGGATGAA
CAAAACCCACTACAACCGTCTCAAACCCACCACGTCGGCGGCGCTACGACGGCGGCTGGACTCGATAACGGCGGAGCTGGTGATGA
AGTTGGAGGAGGAGGAGGAGGAGGAGGAATCCTGTCTTTCTCCGAGTTTTCTTTGTCCGACCTGAAAGCAGCCACGAACAACTTCA
GCTCAGACAACATCGTATCAGAAAGCGGCGAGAAAGCCCCGAATCTTGTCTACAAAGGCCGACTTGAGAACCGTCGTTGGATCGCC
GTCAAGAAGTTCACTAAGATGGCTTGGCCTCATCCTAAACAATTCGCGGAAGAAGCATGGGGTGTGGGGAAGCTAAGGCATAACCG
GTTGGCGAATTTGATTGGATACTGCTGTGATGGAGATGAGAGGCTTCTTGTTGCTGAGTTCATGCCTAATGATACTCTCGCTAAGC
ATTTGTTCCATTGGGAGAATCAGACAATAGAATGGGCTATGAGGTTGCGAGTAGGGTATCATATAGCTGAAGCTTTGGATTATTGT
AGTACTGAGGGTCTTCTGTTGTACCATGATTTAAATGCTTACAGGGTTCTCTTTGATGAGGATGGTGATCCTCGTCTCTCTTGTTT
CGGCTTGATGAAGAACAGCCGGGACGGTAAAAGTTATAGCACAAATCTAGCATATACACCACCTGAGTATCTAAGAAATGGAAGAG
TGACACCTGAAAGTGTTACTTACAGCTTTGGAACTGTGCTTCTTGATTTACTTAGCGGCAAACACATCCCTCCAAGCCATGCTCTG
GATATGATACGTGGCAAGAATATTATCCAGTTGATGGATTCACACCTTGAGGGTAAGTTCTCAACGGAAGAAGCTACCGTAGTTGT
CGAACTCGCCTCTCAGTGTCTGCAATACGAGCCTCGAGAGAGACCTAACACAAAAGATCTCGTCGCCACACTTGCACCGTTACAAA
CTAAACCAGATGTTCCTTCTTGTGTAATGCTTGGAATAAAGAAGCAAGAAGAGACACCTCCAACGCCACAGAGGCCACTTTCGCCG
TTAGGTGAAGCTTGCTCAAGAATGGATCTCACAGCTATTCACCAGATCTTGGTCATGACACATTACAGAGATGACGAAGGGACCAA
CGAGTTATCTTTCCAAGAATGGACACAACAGATAAAAGATATGCTTGATGCAAGGAAACGTGGTGATCAAGCTTTCCGTGATAAAG
ATTTCAAAACCGCCATAGACTGTTACTCACAGTTTGTAGACGTTGGAACAATGGTGTCACCAACTGTGTTTGTTCGGAGAAGTCTA
TGCTACTTGCTGTGCGATCAGCCAGACGCAGCACTACGCGACGCGATGCAAGCGCAATGCGTGTATCCTGACTGGCCAACGGCTTT
CTACATGCAGTCCGTGGCATTAGCGAAGCTGAATATGAACACAGACGCAGCTGATATGTTGAACGAAGCAGCTCAGCTTGAAGAGA
AGAGACAACGAGGAGGCGGCAAAGGATCTTGATTCTTGAGACAAGACCTGTGTTTACATCTTCTTGTAAAGTTTGTTTAGCTTCAG
GAGATTCTTTCCTGTTGTTGTGATTGTTGATTGGGAATGTAATGTAACCATAGAGGGAGGAAAAAATTGTTAATGTTTGTTTGTAA
TGATATACATCTTATAAGAATGTTCCGATCATATATATCTCTCTAACGCACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567980 BR-signaling kinase 1 [Arabidopsis thaliana] | 2430 | 9e-272 |
| XP_002867085 hypothetical protein ARALYDRAFT_328224 [Arabidopsis lyrata subsp. lyrata] | 2416 | 4e-270 |
| XP_002281613 PREDICTED: hypothetical protein [Vitis vinifera] | 2202 | 3e-245 |
| XP_002306223 predicted protein [Populus trichocarpa] | 2200 | 4e-245 |
| CAN74078 hypothetical protein VITISV_000979 [Vitis vinifera] | 2199 | 6e-245 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q944A7 Probable serine/threonine-protein kinase At4g35230 | 2430 | 4e-273 |
| Q9FHD7 Probable serine/threonine-protein kinase At5g41260 | 1495 | 1e-164 |
| Q7XJT7 Probable inactive receptor-like kinase SSP | 809 | 4e-085 |
| O49839 Protein kinase 2A, chloroplastic | 338 | 1e-030 |
| O49840 Protein kinase 2B, chloroplastic | 327 | 3e-029 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9H1Q4 Predicted protein | 2200 | 3e-245 |
| A5B2F1 Putative uncharacterized protein | 2199 | 4e-245 |
| B9HQY1 Predicted protein | 2175 | 2e-242 |
| B9SID0 Receptor protein kinase, putative | 2171 | 7e-242 |
| B9H5F7 Predicted protein (Fragment) | 2117 | 1e-235 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G35230.1 BSK1 (BR-SIGNALING KINASE 1); ATP binding / binding / kinase/ protein kinase/ protein tyrosine kinase | 2430 | 3e-274 |
| AT5G59010.1 protein kinase-related | 1585 | 3e-176 |
| AT1G63500.1 ATP binding / binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 1527 | 2e-169 |
| AT1G50990.1 protein kinase-related | 1524 | 4e-169 |
| AT3G54030.1 protein kinase family protein | 1516 | 3e-168 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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