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Information for unigene UN10769
| FASTA Sequence |
| Unigene ID: UN10769 | Length: 1172 |
SSR | | GTCTTGAGAGGCGTCCACGGTGAGCATCTCTCTCGTCCTCCCTTGGTTGAAGCAATATCTTTTGATCCACTCCTTGCAGGGAGAAA
ACTCATTGCTGATTGCTGGGATCCACATGATATGGTGACGATACCAAAGGAAGTACGGTTCCCTCATTGGAAGCGATGGAGGGAAC
TCAACACAAGATACTGTCGAGATGTAAGGAACTTTGTGAGGGGAAGAGGCCTTCTCAGCGATCTTGCTACAAGAATCTGCGGAAGT
GGTGACGTATTCACAGATGGAAGAGGTCCTGCTTTCTCCTTCAACTACGTTTCAAGAAACTCAGGACTCTCTCTTGTGGACTTGGT
CAGTTTCAGCGGCAGCCCTGAGCTAAGTTCAGAGCTAAGCTGGAACTGTGGGGAAGAAGGAGCAACAAACAAATCAGCTGTTCTTC
AGACAAGGCTGAAACAAATCCGCAACTTCTTGTTTATACAGTATGTCTCGCTTGGCATCCCTGTGCTCAACATGGGAGATGAATGT
GGAGTCTCTACAAAAGGATCGCCGTTGTTGGAATCACGGAAGCCCTTTGACTGGAACATGTTGGCGTCAGCTTTCGGTTCGCAGAT
CACGCAGTTCATCTCTTGCATGACTACAGTTAGAGCAAGGAGAGGCGATGTGTTTCAGAGGAGGAACTTCTTGAAACCTGAGAACA
TTGTTTGGCATGCAAACGACCAAACAGCTCCGAAGTGGGAGGACTCTTCTTCCAAATTCTTGGCGTTGGAGATCAAAGCTGAGACA
GTGGAAGAAACAACCGCGTTGTCACCTGTTGAGCCAACCGAGCCAAAGAACAATGACCTCTTCATTGGATTCAATGCAAGTGATCA
ACCTGAGAATGTTATATTGCCTTCACTTCCTGATGGAAGGGAATGGAGGCGGTTGGTGGACACAGCTCTTCCTTTCCCAGGGTTTT
TCTCTGTTGAAGGAGAGACTGTTGTAGCAGAAGAAGAAGAAGAAGAAGAAGAAGAGATGAATCAACCAGTGATGTATGAGATGAAG
CCGTACAGTTGCACCCTTTTTGAAACCATCAATGCTACTACTACTGGTTAGAAACTCAAATTATGATCTTTGTATATGTTAAAAAG
ATTGTGTTGTAATGTTTGAGATAAGAATATTTAATCAAATCAATTACTTTCCAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_171830 Isoamylase 2 [Arabidopsis thaliana] | 1536 | 2e-168 |
| AAM98123 putative isoamylase [Arabidopsis thaliana] | 1536 | 2e-168 |
| XP_002889452 ATISA2/BE2/DBE1/ISA2 [Arabidopsis lyrata subsp. lyrata] | 1532 | 7e-168 |
| XP_002533079 isoamylase, putative [Ricinus communis] | 1122 | 2e-120 |
| XP_002271798 PREDICTED: hypothetical protein [Vitis vinifera] | 1106 | 2e-118 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8L735 Isoamylase 2, chloroplastic | 1561 | 1e-172 |
| O04196 Isoamylase 1, chloroplastic | 213 | 3e-016 |
| Q9M0S5 Isoamylase 3, chloroplastic | 150 | 5e-009 |
| P0A4Y5 Glycogen operon protein glgX homolog | 127 | 3e-006 |
| P0A4Y4 Glycogen operon protein glgX homolog | 127 | 3e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T4B0 Isoamylase, putative | 1122 | 2e-120 |
| A4PIS9 Isoamylase-type starch-debranching enzyme 2 | 1046 | 1e-111 |
| Q105A1 Isoamylase isoform 2 | 1043 | 2e-111 |
| Q84YG6 Isoamylase isoform 2 | 1007 | 4e-107 |
| B9P6X1 Predicted protein | 882 | 1e-092 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G03310.2 isoamylase, putative / starch debranching enzyme, putative | 1561 | 1e-173 |
| AT1G03310.1 isoamylase, putative / starch debranching enzyme, putative | 1561 | 1e-173 |
| AT2G39930.1 ISA1 (ISOAMYLASE 1); alpha-amylase/ isoamylase | 213 | 2e-017 |
| AT4G09020.1 ISA3 (ISOAMYLASE 3); alpha-amylase/ isoamylase | 150 | 5e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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