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Information for unigene UN10783
| FASTA Sequence |
| Unigene ID: UN10783 | Length: 1026 |
SSR | | GGAGTGGTAGAAGAAGAAAAAAAAAATCTGAAGTAAGGTGTATATGAGATTGAGAAGATAAAGGGATCGGATCTAGCTCTCTTCTT
CTTCTTCTACCTCGTCGATCGAAGAGGTTACGGCAAAATTATGGACAAAGGCAAAGCAGTGATGGGTACTGGTCGGAGATGGGCCG
TGGATTTCTCCGACCAATCTACTGTTCCATCTACCCGCGACATCCTCGACCCATCTGGCTTCTCTCGTGCTTCTCCCGAACAGGAT
GATTCAGCAACGAGCCGCCAAAAGAAAGACGCTGAAGCTAATTGGAAACTTCAGAAAGCATGGGAAGTAGCGCAGTCTCCGTTTAA
GAATCTGATGATGATGGGGTTCATGATGTGGATGGCTGGCAACACTGTTCATCTCTTTAGCATTGGTATTACTTTCTCTGCTCTTT
GGCAGCCTCTTAGCGCCCTCCAGAGTGTTGGCAAGATTTTTGAGCCATTCAAGGATAACAAGGTGGAACTACTTATGCCCAAACTA
GTGTTTCTTGCCCTTAACCTTGGAGGCTTAGCTTTGGGTATCTGGAAGCTCAACACTTTGGGGCTTCTTCCAACACATGCATCAGA
CTGGGTTTCATCTCTACCCCCTCCTCAGGAGGTTGAACACTCTGGTGGAGGATTTGTTTTCCACTGATAAGCAAGTCTCTGTCTCT
GTCTCGTATTTTAAATAATCCGCCAAAACTGGGAAGATGATGAAGACATTTTTTGTGAGATAACCGCCAGAGAAACTTAAATGATT
TAGTTACAAAAAAAAAAAGAAACTTAAATGATTTGTTTAAACCTGTCATGAGGGGAAGATTTATATGAACCTCTTCTTGTAGCTTT
TTCAAAAACATTCAGAAACCATTTAGCTTTTTTTTTTCACTTTTTAATTATGATGTTCATTATTCATCATCACTGTGAACTGTATT
ATTGACGCTGAAGGGACCTAGTTCTCCCAGCTTTTTGTTTCTCATCTTTCTTGACCAACCAATGAAAGCATTTTGTACTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568238 uncharacterized protein [Arabidopsis thaliana] | 916 | 2e-096 |
| XP_002871440 hypothetical protein ARALYDRAFT_325616 [Arabidopsis lyrata subsp. lyrata] | 859 | 6e-090 |
| CAB96833 putative protein [Arabidopsis thaliana] | 848 | 1e-088 |
| NP_001078568 uncharacterized protein [Arabidopsis thaliana] | 848 | 1e-088 |
| XP_002309687 predicted protein [Populus trichocarpa] | 813 | 1e-084 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6GR43 Transmembrane protein 85 | 267 | 1e-022 |
| Q6P011 Transmembrane protein 85 | 266 | 2e-022 |
| Q3T0K8 Transmembrane protein 85 | 258 | 1e-021 |
| Q5J8M3 Transmembrane protein 85 | 256 | 2e-021 |
| Q9CZX9 Transmembrane protein 85 | 256 | 2e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q93VE6 AT5g10780/T30N20_50 | 916 | 1e-096 |
| A8MQD8 Uncharacterized protein At5g10780.2 | 848 | 8e-089 |
| Q9LEW1 Putative uncharacterized protein T30N20_50 | 848 | 8e-089 |
| B9HB78 Predicted protein | 813 | 9e-085 |
| A9PHF1 Predicted protein | 807 | 5e-084 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G10780.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 281 Blast hits to 281 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 83; Plants - 23; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). | 917 | 5e-099 |
| AT5G10780.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 281 Blast hits to 281 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 83; Plants - 23; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). | 848 | 5e-091 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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