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Information for unigene UN10795
| FASTA Sequence |
| Unigene ID: UN10795 | Length: 1626 |
SSR | | GGGGACAAAATCGAGTTTCTGATTCTGACGACGACCTTTGACCGCAAATCGTCTCGCAGATAGCAGTTGAGAGCCTTCTAAATAGT
TTTGGGAATGGATAAAGGAGCACCTCCTCCTCCTCCTAGCATCTTTGTGAACGATGGGTCCTTCATGGAAAGATTCAGACAGCTTC
AACAGGAGAAGAAAGATGAAGCCAAGGATAAGGCTCCGGAGTCCAAGCCTGTGAAGATTATTATATCTGGGGTTTCTAATCCTAAG
CCTTCTTCTTCTGCTACTAAAACTTCCATTGGGTTTAAGACCAATGATGCCCAGAAAAAAGGTGGTAAGCTTGCCTTCAGCTTGAA
GCAAAAGTCTAAGCTTCTCGCACCTCCTGTGAAGCTTGGCGAAGAAGAGGATGAGGAGGATGTGCAGAATGATCAAAGCTTCGGAT
CTGCTAAGCGTCCAAAGCTAGACGCGCCTGCCAAGTCAACCAACTGTCAGATGTTGTTGTTGCACCTCCTGCGCCCAGTGACCCTA
ATGTGAAGAATGCTGCTGACAAATTAGCAAGCTTTGTTGCTAAGAATGGAAGGGCATTTGAGAATGTTACACGCCAAAAGAATCCT
GGGGATACACTATTTAAATTTCTTTTTAATGAGAGCTGTGCGGATTACAAGTACTATGCATTCAGGCTGTCTGAAGAGGAAAAATC
TATTTCACAAGCCAAGGAATCTGGTGTACTTCACAGTGGTGATGCAGGCCAGCGGATGTCCACCACACCAATCACTTCGCAAAAGC
CAGCTCCGCAACAAAGAGGCTATCAGACCCTGCTTCGGCTCTCTACGATGCTTCTGTAGAATCTGGAGCTTCCTCTAGATCTGTTC
AGGCATCAGTTACAAGACCAAACAACAGCGACTCTTATAGTGCGCCGAGGGCTGCAGACCCTATTTCGATGATGGAGTTTTACATG
AAAAAGGCTGCCCAAGAAGAGAAGATGAGACGTCCTAGACAGTCAAAAGATGAAATGCCCCCGCCAGCTTCTCTTCAAGGTTCATC
TGCTAGTTCCCTCCACAGACTCCGGAAAGAGAGGTCATCACATGGGTGATTATATCCCACCGGAGGAGCTAGATAAGTTCCTTGCA
AAGTGTGACGATGTAGCTGCATTGAAAGCCACAAAGGAGGCAGCTGAGAAGGCTAAGATCCAAGCAGATAATGTCGGACATAAGCT
CTTGTCAAAAATGGGTTGGAAAGAAGGTGAAGGTATAGGAAGCTCTAGAAAGGGTATGGCAGACCCGATAATGGTAGGCGATGTAA
AGACTAACAACTTGGGAGTTGGGGCTTCTGCTCCAGGAGAGGTTAACCCTGAAGATGATATATACGAGCAGTACAAGAAGCGAATG
ATGCTTGGTTACAAACACAGACCCAACCCACTGGGAAATCCAAGAAAAGCTTATTATTAAGAACCATTCAGTGTGCTGCGGACAGT
CATGAGCTATCTCTCACCCCACCAAGCCCCAGCTGATCTTTGCTTTTCTATTAAAAATATAATGTGTTTGTTTGGTTTTGGATTGT
TTGCAAATAGATCTATATCAGTTGGGATTGGAATTGATTCTTGTTTCTTTATTATAATGTTTTTAAAGACCGGTACAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566957 Splicing factor 4-like protein [Arabidopsis thaliana] | 1013 | 2e-107 |
| XP_002264043 PREDICTED: hypothetical protein [Vitis vinifera] | 827 | 6e-086 |
| CBI24858 unnamed protein product [Vitis vinifera] | 823 | 2e-085 |
| XP_002298445 predicted protein [Populus trichocarpa] | 820 | 4e-085 |
| ACA24495 gamma reponse I-like protein [Cucumis sativus] | 810 | 6e-084 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94C11 Splicing factor 4-like protein | 1013 | 7e-109 |
| Q8IWZ8 Splicing factor 4 | 316 | 5e-028 |
| Q8CH02 Splicing factor 4 | 312 | 1e-027 |
| Q68FU8 Splicing factor 4 | 312 | 1e-027 |
| Q8CH09 Putative splicing factor, arginine/serine-rich 14 | 156 | 2e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GFQ8 Predicted protein | 820 | 3e-085 |
| B3TLK2 Gamma reponse I-like protein | 810 | 4e-084 |
| B3H4X1 Uncharacterized protein At3g52120.2 | 662 | 6e-067 |
| B9RHH0 Arginine/serine rich splicing factor sf4/14, putative | 564 | 1e-055 |
| B9HNL7 Predicted protein | 561 | 3e-055 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G52120.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein | 1014 | 5e-110 |
| AT3G52120.2 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein | 662 | 3e-069 |
| AT3G52350.1 D111/G-patch domain-containing protein | 123 | 1e-006 |
| AT5G26610.1 D111/G-patch domain-containing protein | 116 | 6e-006 |
| AT5G08535.2 D111/G-patch domain-containing protein | 116 | 6e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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