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Information for unigene UN10809
FASTA Sequence |
Unigene ID: UN10809 | Length: 1417 |
SSR | | AAAGAAAAAAAATCTGATTACATTTTCATTGAAAATTCGAGATGTGAAGTAGGGACACGAAATAGATTTTCCCATAGCCATAATCA
GAAATCAAAAACGAGAAAAACTAATAATCATAGATATAGAAAAATAAGGATGTTCAAAAAGATATACTAAATTAATAAAAGATCCT
GATTAATCATGTCCCAAGCATAACTTTTTCTACCATTTAAGATGAGAATCATCATTAGATGAACACGGGAAGAGAATGTATTGTTG
ACCACTCATACATAATTACGATAATCCAAAAAGCAAAAAGAGAGTCGAAACATCTCCACATAATCTCAAACCTTTGGTGGCATATT
GTAATGAAGACATGAAGTTGTTTTAAGAGTTTAATAAGTATCGCTTTGCAGTTTCAGTATCCAACTCTTCATAAACAAGTTTCTTG
TGGAGTTTCTCGAAAGCCTTGCAAAACCTCTCTGCTTCAACCTCACCAACCTTATTCGCAGCAGCCGTTCTGAGTTTATCCCAGAA
TGTAAACGTATCTTGATCAGTCTTCAGATCTTTAAAGTCTTTCGGCTCATCAACACTTAGCTGCTTTGAGTGATTCCAAGTTCCAT
CACACTCTCGCTCAACAATTGACTGTGAAGTTGATTGCGCTGGACTTGAAGAATCTAATTCAGAACGGTGGTCGCGAGAGCGTACG
ACGGGGAATAGATTGAGGATGCTTCGGAACTCTTGCTCGTCCATCGCCTTCCTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTTGTTGTTGCCTGCTGGTGAGATCACCTGTTACTCAACTTCTTCGATCTTATCTTCTCTAAACTTGTCACCTTTTTGCGAG
AAACACTTGTCTTGAGTTGGTAACTCGATGGCGAGGAAGAAGATCAGAGAGTACGACCCCAAGAGACTTCTCAAGGAGCACTTGAA
ACGTCTCGCTAACATTGGCCTCCAAATCCGCTCTGCTCAGGTGACAGAAGCTACGGATTTCACTGAGCTGACCAACCAGGAGTCAT
GGCTCTCTTCCACAAAGCTAGTTGTGAAGCCTGATATGCTGTTTGGAAAACGCGGGAAGAGTGGTTTGGTAGCTCTGAAGCTGGAT
CTTGCTGAAGTTTCAGAGTTTGTCAAAGCCCGCCTCGGTACTGAGGTTGAGATGAGTGTATGTAAAGCTCCTATCACTACATTCAT
TGTGGAGCCATTTGTGCCTCATGATCAAGAGTACTATCTTTCTGTAGTGTCTGATAGGCTTGGCTGCACTATAAGCTTCTCTGAAT
GTGGTGGTATTGAAATTGAAGAGAATTGGGACAAGGTGAAGACTGTGTTTCTTCCTGCGGAAAAGTCAATGACGCTTGAAGTATGT
GCTCCACTGATAGCAACACTTCCTCTTGAGGTTAGAGGTAA
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GenBank top hits (Blast detail) | Score | e value |
NP_172414 ATP-citrate lyase A-3 [Arabidopsis thaliana] | 850 | 1e-088 |
XP_002889749 ATP-citrate lyase A-3 [Arabidopsis lyrata subsp. lyrata] | 847 | 2e-088 |
XP_002512567 ATP-citrate synthase, putative [Ricinus communis] | 794 | 3e-082 |
XP_002319466 predicted protein [Populus trichocarpa] | 793 | 5e-082 |
XP_002280514 PREDICTED: hypothetical protein [Vitis vinifera] | 786 | 3e-081 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P16638 ATP-citrate synthase | 247 | 4e-020 |
Q91V92 ATP-citrate synthase | 246 | 5e-020 |
Q2TCH3 ATP-citrate synthase | 238 | 4e-019 |
Q32PF2 ATP-citrate synthase | 236 | 7e-019 |
P53396 ATP-citrate synthase | 235 | 1e-018 |
TrEMBL top hits (Blast detail) | Score | e value |
O80526 At1g09430/F19J9_9 | 850 | 8e-089 |
B9RFP8 ATP-citrate synthase, putative | 794 | 2e-082 |
B9I6M7 Predicted protein | 793 | 3e-082 |
A5AQP2 Putative uncharacterized protein | 785 | 3e-081 |
B9N432 Predicted protein | 785 | 3e-081 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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