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Information for unigene UN10810

FASTA Sequence
Unigene ID: UN10810Length: 1699 SSR 
GGGGCGCTTAATTAAACATGACTTGAGAGAGCCCCTTCGCTCAAGCTCAAGCTCTTCTTCTCTCTATCCTTTAAAGCGGCCATTGG
AGGTCCAGAAAGAACCACTTAAAGCTATATAACTTGAGTTAGTTAGTACACAAGAAGATGGAAACAGAAGAGGATATGTGCCAGAA
CAATTGGGGAAGTGCTTCCATCTTAGATTACAAGATGGCTATGGAGGAGGAGGAGGAGGAGGAGGAGGCTCCTAATTTTCAAGATT
TCAAAGCTTCTTCGGGCCAAGCTTTCCTGCAAGGGGTCAAGGCTCAAGCGTGGGAACCGAGGACCATACTGAGCAACCTGTCCTTT
ATGGAACATAAGATTCACGAACTGCAGCATCTTGTTCATCTCATCATCCTTGGCCGAAACGGGCAGCAGCTTCAAGAGGAGCAACA
ACAACTCATAACCGCTAATCTTACTTCCATAATCATACAGCTGATTTCAACTGCAGGTAGTCTTCTTCCATCTGTTAACCATAATA
ATAATAATATGTCGTCTACTACAGCCCCCGGTTCAGCCTTGTTCCCTTATCCAAGGGAGGCTAATAACCTTGCTTCACAGACCAAA
GAGCTCGATTTGCCTAAGCCCATTGTTGAAGAAAGCCATATACATGAAATGAAAAACGAAGATGATGCCGAGGAAGGAGGAGGAGA
GGACCTCCTCCTGGTTCTTACGAGATAAAGCAGCTCGAGAAAGAGGAGATCCTCGCTCCCCATACCAACTTCTGCACTATCTGTGG
CAAGGGTTTCAAGAGAGACGCTAACCTGAGGATGCACATGAGAGGTCACGGCGACGAGTACAAAACTCCAGCAGCTCTAGCCAAAC
CCACCAAAGAAACCCAACCCGGGTCTGAGCCCATGCTGATCAAAAGGTACTCTTGCCCATTCCCTGGCTGCAAACGCAACAAGGAT
CACAAAAAGTTCCAGCCTTTGAAGACGATACTATGCGTCAAGAACCATTATAAACGCACCCACTGCGACAAAAGCTTCACCTGCAG
CCGCTGCCATACCAAGAAATTCTCTGTCATTGCTGATCTCAAAACCCACGAGAAGCACTGCGGGAAAAACAAGTGGCTCTGTTCCT
GTGGTACCACATTCTCGAGGAAAGACAAGCTGTTTGGTCACATTGCTCTGTTCCAGGGACACACTCCTGCGATCCCACTTGAAGAG
ACAAAACCTTCGGTTGGTGCATCTTCTTTTCAGAGAGGGAGCTCCGGTTGCGGGAACAATAACAACGACGCAGGAATGGTTAGTTT
CAGTCTTGGTTTTGCAACAAATGCTAATCAAGAGACCTCACAGCCTGGTTTCATGGATGGGAAGATAAGCTTCGAGGAGGCTTTCT
CACCGCTGAGCTTTGATACATGCAATTTTGGAGGGTTCCCGCGATCTATATTTGATGATTTTGAGAGTTCATTTCAAATGCTTATT
TCAAGTGCATGTGGTTGCTCGCCCGTGAATGGTGGTGGTGATTGCTCTGTTTCGGATACTAGTAGTGTTTAAGGCATTATATGATT
AAAAGCTATTTTGCAAGATGCCCTAGTTTTTCTTTTAGCCTTAGGCAACTCCTTTGTATCGGTACTTTTGTTATTTGCTAGAATAA
ATATCAGGAAGCAAAAGTGTACTTGCTTTTCTTAAAATCTGTTGCTAATGTAAGAAAGTTAGATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891100 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]12452e-134
NP_174697 protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Arabidopsis thaliana]12409e-134
NP_001031140 protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Arabidopsis thaliana]12409e-134
BAF62149 C2-H2 zinc finger protein [Arabidopsis thaliana]12409e-134
BAH56806 AT1G34370 [Arabidopsis thaliana]12409e-134

Swiss-Prot top hits (Blast detail)Scoree value
Q9C8N5 Protein SENSITIVE TO PROTON RHIZOTOXICITY 112441e-135
Q8VWG3 Protein TRANSPARENT TESTA 12772e-023
Q700D2 Zinc finger protein JACKDAW1803e-012

TrEMBL top hits (Blast detail)Scoree value
C0Z277 AT1G34370 protein12406e-134
Q2V4J0 Uncharacterized protein At1g34370.312406e-134
A5BSF5 Putative uncharacterized protein9987e-106
B9MW64 Predicted protein9881e-104
B9IQK8 Predicted protein9762e-103

Arabidopsis top hits (Blast detail)Scoree value
AT1G34370.2 STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding12441e-136
AT1G34370.1 STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding12441e-136
AT1G34370.3 STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding12441e-136
AT5G22890.1 zinc finger (C2H2 type) family protein5971e-061
AT3G20880.1 zinc finger (C2H2 type) protein (WIP4)2942e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  100%

Unigene MembersMember information