Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN10813

FASTA Sequence
Unigene ID: UN10813Length: 1558 SSR 
GGAGAACAGAACAAAACCAAACCATTCCTCGACGACCAGAGCAAAAATAAAATCATTCTCTGATCTCTTTCTTCATATGTTCCTGT
CGTCATTTTTCTAATCCGATAAGTCTTTTCAGATAGATTTCAAGAGAAAGAAAGAAAGGAAGATGGATGACGTTAAAGATAAGCTA
AAAGGATTCATGAAGAAAGTCAATCTCTCTTCTTCCTCCGGCAAATTCAAAGGCTCTGGTCGAGTTCTCGGATCTTCTTCTTCTTC
TTCTTCCTCTGCACCCGTTAACCCGATTCAAAACCGGTTTAACCCTCCTCAATCTTCAAATCCGAATCCGACTCCCAGACCTTCCT
CTTCTCCTTCTCCATCAGCTGCTCCGTTGCCTGAGAAACCCGTATCTTCCGGGTCACCGAAAAAACAGGATCCTGATCCGGTTCGT
GCTCCTCCTCCACAAGACGGGTTCGACCCTTACGGAGCGTTCATCACTTCTTCCAACAGATCTCAAAACGGATACTCTCTCAACAT
GTTCGAGTGTCCGATCTGCGGCAACCCTTTCAAAACAGAGGAGGAAGTCTCCGTCCACGTGGAGAGCTGTCTCGGTGACACCACCA
CCACCAACGAAGACGAGCCTGCATCGGAGAAGTCCTCCGAGATGGAGAAGCTTGTGGTTGTGTATCTCTCCGGGAAACCGACGGAG
AGTTCGGTTGATGTTTTGCTTAGGTTGTTTAAGAACATAGTGAAAGAGCCTGAGAACGGTAAGTTTAGGAGGGTTAGGATGAGTAA
TGCTAAGATTAAGGAAGCGATCGGTGATGTTGCGGGAGGCGTTGAGCTTCTCGAGCTTGTTGGGTTTGAATTGAAAGAGGAAAATG
ACGAGATTTGGGCGGTTATGGATGTTCCCGGAGGAGACCGAACTCAACTGATCAGTGAAGTTGTCGGAATGTTGGAAAAAAGAAAG
ATCGAAATGATTGAGGTTCAAGTGGAACCAGTGGCTCCGAAGAAGATCGATAGAGAGATTCGTGTCTTCTTCTCGGTTGCTGAGAA
CGTAGCGTCGAGAATAGAGGTGCCTGATTCGTTCTATAGTCTCTCTGCGGATGAGATCAAAAGAGAAGCGGATTTGAGGAGGAAAA
AGATTGCGGAGTCACAGCTTTTGATCCCGAGATCTTACAAGGAGAAACAAGCGAAAGCAGCTAGAAAGAGATACAAAAGGAGTATG
ATTAGAGTTCAGTTTCCTGACGGTGTTGTGCTTCAAGGTGTGTTTGCTCCTTGGGAACCAACCATTGCTCTCTATGAGTTTGTGAG
CTCTGCCTTGAAAGAGCAAAGTTTGCAATTCGAGCTTTTGGATCCTGTCCTGGTTAAACGGCGTGTGATTCCGCATACTCCAGCTC
CGGGACAGAAACCAAGAACCTTGGAGGATGAAGAGCTTGTTCCCTCAGCGCTAATCAAGTTTAGACCGATCGAGACTGACTCTCTC
GTCTACACTGGTCTATGCAATGAACTCCTGGAGATCAGTGAACCACTCACATGATCATTTCGAGTTCCACAGAAGATTTGGCTTCA
AACGGCTTTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876768 hypothetical protein ARALYDRAFT_484080 [Arabidopsis lyrata subsp. lyrata]18814e-208
NP_565271 UBX domain-containing protein 2 [Arabidopsis thaliana]18653e-206
AAM60904 unknown [Arabidopsis thaliana]18511e-204
XP_002284867 PREDICTED: hypothetical protein [Vitis vinifera]13492e-146
CAN79664 hypothetical protein VITISV_031014 [Vitis vinifera]13357e-145

Swiss-Prot top hits (Blast detail)Scoree value
Q9BZV1 UBX domain-containing protein 62717e-023
Q2KIJ6 UBX domain-containing protein 62592e-021
Q9BZE9 Tether containing UBX domain for GLUT41589e-010

TrEMBL top hits (Blast detail)Scoree value
Q9ZU93 CDC48-interacting UBX-domain protein18652e-206
Q8LGE5 Putative uncharacterized protein18517e-205
B9SJ14 Nucleic acid binding protein, putative14224e-155
A5C492 Putative uncharacterized protein13355e-145
C5XC58 Putative uncharacterized protein Sb02g0242808543e-089

Arabidopsis top hits (Blast detail)Scoree value
AT2G01650.1 PUX2 (PLANT UBX DOMAIN-CONTAINING PROTEIN 2); nucleic acid binding / zinc ion binding18667e-209

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  17%
 
213  50%
 
111  17%
 
61  17%

Unigene MembersMember information