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Information for unigene UN10815
FASTA Sequence |
Unigene ID: UN10815 | Length: 636 |
SSR | | GGATCGTTAGATGCTTCTTCTTCTTCTTCACCAGTGAAAAGATAAAAGAAATGGCGGTTTCTCTCCCGAACTCGTTCCTTCAGATC
AATCCATGTGCTCCTTCTCTGGCGATTAGAAAGCCGCCGACTACGGCGGCAGCGATTGGCGCGAGAGGAGGAAAGAAACCGGCGGG
AATTAGTCCCTCGGTGGTTCAAGTGACGTGCAGGAAGAAGGATTTGCACCCCGAGTTTCACGAGGACGCCAAGGTTTACTGCAACG
GGGAGCTCGTCATGACCACCGGAGGGACCAAGAAAGATTACGTTGTCGATGTTTGGTCCGGTAACCACCCGTTTTACCTCGGGAAC
CGCTCCGTTTTGATGGTTGATGCTGATCAGGTTGAGAAGTTCCGTAAGAGGTTCGCCGGGCTGTCGGAGATTATGGAGATTCCTGT
CCTGATAGGAGAGATCGTCTTGCCGACCAAGAAGAGCAAAGGTGCTGGTAAAGGGAAGAAGAGATGATGATGAGACTTTTACAATG
TTTTTTGGTAAAACGTTAGATTTGTTTTTTTTTTTATTCGACCAAAAGTGGACTTGCTTTGGCGCTGTTGAATTTGTATGTTACAT
TTTTTCTGAATGCAAATGATTAATGCTTTTTTTT
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GenBank top hits (Blast detail) | Score | e value |
XP_002887588 EMB2184 [Arabidopsis lyrata subsp. lyrata] | 612 | 1e-061 |
NP_565109 50S ribosomal protein L31 [Arabidopsis thaliana] | 578 | 1e-057 |
XP_002510420 50S ribosomal protein L31, putative [Ricinus communis] | 445 | 3e-042 |
CAN64555 hypothetical protein VITISV_040159 [Vitis vinifera] | 432 | 8e-041 |
XP_002281680 PREDICTED: hypothetical protein [Vitis vinifera] | 432 | 8e-041 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9FWS4 50S ribosomal protein L31, chloroplastic | 578 | 5e-059 |
B2ITM6 50S ribosomal protein L31 | 196 | 9e-015 |
Q8YPK8 50S ribosomal protein L31 | 194 | 2e-014 |
Q3MF92 50S ribosomal protein L31 | 194 | 2e-014 |
Q7V9Y9 50S ribosomal protein L31 | 194 | 2e-014 |
TrEMBL top hits (Blast detail) | Score | e value |
B9R7X7 50S ribosomal protein L31 | 445 | 2e-042 |
A5AHS8 50S ribosomal protein L31 | 432 | 6e-041 |
Q9ZT04 50S ribosomal protein L31 (Fragment) | 399 | 4e-037 |
C6SYN1 50S ribosomal protein L31 | 398 | 5e-037 |
B7FGZ7 50S ribosomal protein L31 | 393 | 2e-036 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT1G75350.1 emb2184 (embryo defective 2184); structural constituent of ribosome | 593 | 8e-062 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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