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Information for unigene UN10851
FASTA Sequence |
Unigene ID: UN10851 | Length: 1880 |
| SNP | AGAACAATGGCGTCTACAGCTAGCCATCTTGTTGTTGTTGTCACCATGTTGGTCTCAGCCATGGCCGTAGTAGCAGAATCCAACAC
GCTTCAAGATTTTTGTGTTGCTGATTTGTCCAATGCTGTCAAGGTCAACGGCTACACATGCAAGGACTCGACACAAGTAACACCTG
AAGACTTCTACTTCCAAGGCTTAGCCACAGCCAAAAACGCTGCAAATTCCTCCACAGGAGCCATCGTAACCGGAGCCACCGTGGAG
AAGCTACCAGGACTCAACACTCTCGGCCTCTCCATGTCCCGCATAGACTACTCACCAAACGGCCTAAACCCACCCCACGTTCACCC
ACGTGCCTCCGAGGTCATCTTTGTCCTAGAAGGTCAGCTCTACGTCGGCTTCGTGACAACCGCTGGAAAACTCGTAGCTAAATACA
TCAACAAAGGAGATATGTTCGTTTTCCCCAAAGGGCTTCTCCATTTCCAGAAGAACATTGCTGGATCAGCTCCAGCTTCTGTGCTA
GCAGCTTTTGATAGCCAGTTGCCTGGAACGCAGTCGCTCGTGGCAACTCTCTTTGGAGCTCTTCCTGACAACATTCTCGTTGAGTC
GTTCAAGATCAAACCCAAACAGGTTAAGACAATCAAGGCCAGATACCAACCAAAGAAATGAGGAGAGAAATAAACAAACATAATCT
TTGTCTTCCTTTTTGAGCTCTAATTGTAAAACATTAAGAAAAGATTTAAAGTCTGGAAACATTTTTAAAACAAAAATCAATGAAAA
GATTTTGTTCTTGTTGTGCGTTCTCATTCTTTTCACTTAGCCGTTAATGGTTGGTGTTGCCTTCCATCTGGAATTGAGAATAAGAC
AATGGGCTTGGATGGTTTCACAAAAGGAACATCACATCTGTAATAGCCTTTCCTCTCAAGCTGAATCACATCTCCACTCTTCAGAC
TCCTCATATTCGAATCACCAAGTGCTAATGTTTCCTTCTTCGTGTAAGGATTCACAAATGTAGCAACCTCATCATCTTCCTCCAGC
TTCTTCTTGGTGATTAAGTAATCAAAATCTGTTAATGTAAGCTTGACCAACTCATTAATCTCAGGCAGCCAAGTGAGCTTCAGCTT
TGTAGTCTTCACAGATCCTTGGAGATTCAAGACGCCAGATAACGCAGTGACACGACCCTCCTCGTCTTTAGTAACCTCTTTCACAA
TAGCATTTCCCCAATCCATCAGAGTCACTTCCTCACCAACAGAGATAACACTCGCATCAGCTCCTTCCAACCATATCCTCTTGGTG
AACGTGGTAGCCTTCTCTCCAGCACCTTCAAACTTCTTGTGCTTCGGTATCAAACGAACAAACGGCTCATCAGGACCATCACTCAA
CGTCAACAGCACACTCCTCTCTTCAACCACAGCCGTATGTCTAGGACACACAGGATCGATGATCTTCTTGTTAATAGACCAGAGCT
TGTCTCACTCCATCAAGTTCAGATTCTTGGAAGCACCCTGCTCGAGAATGAACTGAATCAAAGCCTCTATCTTCAAACCTCTACGG
ACAATGCCTTGGACCGTAGGGAAGCGTGGATCATCCCACCCACCAACCAAACCCTGCTGAACAAACCAGAGAAGCTTCCTCTTACT
CAAAAGAGTGTAAACAAGATTCAAAGGCATCGCGGCCGTAGAAGTGAGGAAGAAGCGAGGGAGCTGATCGAGCAACGTAGCGGAGA
AGAACGGGTGTCCCACTCAGTTTCCTCCCGTCGGAGAAGACGAAAGTAGGGACGGTGGTTGCGGCGGCGGAGGAGTCAATGGTGGA
GTGTCCGCTGGGAAAGAAAGTTTGATCCTTTCCATCTTCTTCTTACTTTGGGCAATGTGTAGAGAGTGAGAGCC
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GenBank top hits (Blast detail) | Score | e value |
NP_850874 glutamyl-tRNA synthetase [Arabidopsis thaliana] | 1292 | 9e-140 |
AAC13597 similar to aminoacyl-tRNA synthetases [Arabidopsis thaliana] | 1292 | 9e-140 |
XP_002872225 hypothetical protein ARALYDRAFT_489491 [Arabidopsis lyrata subsp. lyrata] | 1287 | 3e-139 |
BAF01742 glutamyl-tRNA synthetase [Arabidopsis thaliana] | 1285 | 6e-139 |
XP_002891400 hypothetical protein ARALYDRAFT_473931 [Arabidopsis lyrata subsp. lyrata] | 1265 | 1e-136 |
Swiss-Prot top hits (Blast detail) | Score | e value |
O65252 Probable germin-like protein subfamily 2 member 5 | 860 | 5e-091 |
P93000 Germin-like protein subfamily 2 member 3 | 715 | 3e-074 |
P46655 Glutamyl-tRNA synthetase, cytoplasmic | 700 | 2e-072 |
O13775 Probable glutamyl-tRNA synthetase, cytoplasmic | 683 | 2e-070 |
Q6I544 Germin-like protein 5-1 | 631 | 2e-064 |
TrEMBL top hits (Blast detail) | Score | e value |
O65253 F21E10.12 protein | 1292 | 6e-140 |
O82462 Glutamyl-tRNA synthetase | 1292 | 6e-140 |
Q0WMB4 Glutamyl-tRNA synthetase (Fragment) | 1285 | 4e-139 |
B9N401 Predicted protein | 1144 | 9e-123 |
A5B9C3 Putative uncharacterized protein | 1140 | 3e-122 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G26710.1 glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative | 1292 | 3e-142 |
AT5G26700.1 germin-like protein, putative | 861 | 3e-092 |
AT3G05930.1 GLP8 (GERMIN-LIKE PROTEIN 8); manganese ion binding / nutrient reservoir | 716 | 2e-075 |
AT1G09560.1 GLP5 (GERMIN-LIKE PROTEIN 5); manganese ion binding / nutrient reservoir | 638 | 2e-066 |
AT3G62020.1 GLP10 (GERMIN-LIKE PROTEIN 10); manganese ion binding / nutrient reservoir | 610 | 4e-063 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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