Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN10851

FASTA Sequence
Unigene ID: UN10851Length: 1880  SNP
AGAACAATGGCGTCTACAGCTAGCCATCTTGTTGTTGTTGTCACCATGTTGGTCTCAGCCATGGCCGTAGTAGCAGAATCCAACAC
GCTTCAAGATTTTTGTGTTGCTGATTTGTCCAATGCTGTCAAGGTCAACGGCTACACATGCAAGGACTCGACACAAGTAACACCTG
AAGACTTCTACTTCCAAGGCTTAGCCACAGCCAAAAACGCTGCAAATTCCTCCACAGGAGCCATCGTAACCGGAGCCACCGTGGAG
AAGCTACCAGGACTCAACACTCTCGGCCTCTCCATGTCCCGCATAGACTACTCACCAAACGGCCTAAACCCACCCCACGTTCACCC
ACGTGCCTCCGAGGTCATCTTTGTCCTAGAAGGTCAGCTCTACGTCGGCTTCGTGACAACCGCTGGAAAACTCGTAGCTAAATACA
TCAACAAAGGAGATATGTTCGTTTTCCCCAAAGGGCTTCTCCATTTCCAGAAGAACATTGCTGGATCAGCTCCAGCTTCTGTGCTA
GCAGCTTTTGATAGCCAGTTGCCTGGAACGCAGTCGCTCGTGGCAACTCTCTTTGGAGCTCTTCCTGACAACATTCTCGTTGAGTC
GTTCAAGATCAAACCCAAACAGGTTAAGACAATCAAGGCCAGATACCAACCAAAGAAATGAGGAGAGAAATAAACAAACATAATCT
TTGTCTTCCTTTTTGAGCTCTAATTGTAAAACATTAAGAAAAGATTTAAAGTCTGGAAACATTTTTAAAACAAAAATCAATGAAAA
GATTTTGTTCTTGTTGTGCGTTCTCATTCTTTTCACTTAGCCGTTAATGGTTGGTGTTGCCTTCCATCTGGAATTGAGAATAAGAC
AATGGGCTTGGATGGTTTCACAAAAGGAACATCACATCTGTAATAGCCTTTCCTCTCAAGCTGAATCACATCTCCACTCTTCAGAC
TCCTCATATTCGAATCACCAAGTGCTAATGTTTCCTTCTTCGTGTAAGGATTCACAAATGTAGCAACCTCATCATCTTCCTCCAGC
TTCTTCTTGGTGATTAAGTAATCAAAATCTGTTAATGTAAGCTTGACCAACTCATTAATCTCAGGCAGCCAAGTGAGCTTCAGCTT
TGTAGTCTTCACAGATCCTTGGAGATTCAAGACGCCAGATAACGCAGTGACACGACCCTCCTCGTCTTTAGTAACCTCTTTCACAA
TAGCATTTCCCCAATCCATCAGAGTCACTTCCTCACCAACAGAGATAACACTCGCATCAGCTCCTTCCAACCATATCCTCTTGGTG
AACGTGGTAGCCTTCTCTCCAGCACCTTCAAACTTCTTGTGCTTCGGTATCAAACGAACAAACGGCTCATCAGGACCATCACTCAA
CGTCAACAGCACACTCCTCTCTTCAACCACAGCCGTATGTCTAGGACACACAGGATCGATGATCTTCTTGTTAATAGACCAGAGCT
TGTCTCACTCCATCAAGTTCAGATTCTTGGAAGCACCCTGCTCGAGAATGAACTGAATCAAAGCCTCTATCTTCAAACCTCTACGG
ACAATGCCTTGGACCGTAGGGAAGCGTGGATCATCCCACCCACCAACCAAACCCTGCTGAACAAACCAGAGAAGCTTCCTCTTACT
CAAAAGAGTGTAAACAAGATTCAAAGGCATCGCGGCCGTAGAAGTGAGGAAGAAGCGAGGGAGCTGATCGAGCAACGTAGCGGAGA
AGAACGGGTGTCCCACTCAGTTTCCTCCCGTCGGAGAAGACGAAAGTAGGGACGGTGGTTGCGGCGGCGGAGGAGTCAATGGTGGA
GTGTCCGCTGGGAAAGAAAGTTTGATCCTTTCCATCTTCTTCTTACTTTGGGCAATGTGTAGAGAGTGAGAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850874 glutamyl-tRNA synthetase [Arabidopsis thaliana]12929e-140
AAC13597 similar to aminoacyl-tRNA synthetases [Arabidopsis thaliana]12929e-140
XP_002872225 hypothetical protein ARALYDRAFT_489491 [Arabidopsis lyrata subsp. lyrata]12873e-139
BAF01742 glutamyl-tRNA synthetase [Arabidopsis thaliana]12856e-139
XP_002891400 hypothetical protein ARALYDRAFT_473931 [Arabidopsis lyrata subsp. lyrata]12651e-136

Swiss-Prot top hits (Blast detail)Scoree value
O65252 Probable germin-like protein subfamily 2 member 58605e-091
P93000 Germin-like protein subfamily 2 member 37153e-074
P46655 Glutamyl-tRNA synthetase, cytoplasmic7002e-072
O13775 Probable glutamyl-tRNA synthetase, cytoplasmic6832e-070
Q6I544 Germin-like protein 5-16312e-064

TrEMBL top hits (Blast detail)Scoree value
O65253 F21E10.12 protein12926e-140
O82462 Glutamyl-tRNA synthetase12926e-140
Q0WMB4 Glutamyl-tRNA synthetase (Fragment)12854e-139
B9N401 Predicted protein11449e-123
A5B9C3 Putative uncharacterized protein11403e-122

Arabidopsis top hits (Blast detail)Scoree value
AT5G26710.1 glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative12923e-142
AT5G26700.1 germin-like protein, putative8613e-092
AT3G05930.1 GLP8 (GERMIN-LIKE PROTEIN 8); manganese ion binding / nutrient reservoir7162e-075
AT1G09560.1 GLP5 (GERMIN-LIKE PROTEIN 5); manganese ion binding / nutrient reservoir6382e-066
AT3G62020.1 GLP10 (GERMIN-LIKE PROTEIN 10); manganese ion binding / nutrient reservoir6104e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  18%
 
61  6%
 
105  29%
 
116  35%
 
82  12%

Unigene MembersMember information