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Information for unigene UN10856
| FASTA Sequence |
| Unigene ID: UN10856 | Length: 820 |
| SNP | CAATTAATAGAATAGATTATTTGTTATTACTTGAAAAAAACCTTACACAGACACCACGTAAACATAATATGAGCAACAAATGAATG
AAAATAATAGATAAAACTCATTCAAGTTACAAAGACAATGGCCAAGTAACTTATTTCAAGAACCAATAATTTAAGTGCACACTGCA
GGAACACCTTGAGGAAACCTTTTTTTATCGGTGCAATAGTTGTAGATCATGTACTTACTCTGTGCCCATTTCATTTTTTTCTGGCC
TTCCGGGTCAACTTTTTGAGTGAACCATGGGGCATTCCCGGGGCAAAATGATTTTCCGTTAGCCCAAACACATCCTTCCACATTGT
AGTTTCTGTAAAAGGCAGTGAAAGGAGCTTTTGACCAATCTGTTTTCTCCAATCCTCCCCTTGTGGCCCAATGCTCGGCTTCCCAA
AGGCTTGCGTAGAGCCTCATTGGCTGGTTCTTCGGGAATGGAACTCCCATTGACTCAGAGTTCTTGAACTCTCTAATAGGAATGCC
ATCAACTGTAAAAATAATCCTTTGGGGATTCCATGTGATACAGTAAGTGTGAAAGTTCTTTGTTGGGTCGAACCATAGATGAAACT
GCTGTTCTTTGTCTCCAGAGCCTCGTGTGTAAACATTAGTATGAAGAGTATACGGATGACCACTAATGTTTCCCAAGAACTCGAAA
TCGATCTCATCCCATGTAGTTCCGGGCGATTTAAGATAGAATGTTGTGACTGTACCAGCAGAGTTACCAGGGACAAGTTTCATTTG
AACCTCAGCTTTACATATAGAAACTCCTGATGGGACTGAACCCCGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002888396 ATXTH17 [Arabidopsis lyrata subsp. lyrata] | 1068 | 3e-114 |
| NP_176710 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] | 1066 | 4e-114 |
| XP_002867356 ATXTH19 [Arabidopsis lyrata subsp. lyrata] | 1064 | 7e-114 |
| XP_002867357 ATXTH18/XTH18 [Arabidopsis lyrata subsp. lyrata] | 1062 | 1e-113 |
| NP_194757 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] | 1060 | 2e-113 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O80803 Probable xyloglucan endotransglucosylase/hydrolase protein 17 | 1066 | 2e-115 |
| Q9M0D2 Probable xyloglucan endotransglucosylase/hydrolase protein 18 | 1060 | 1e-114 |
| Q9M0D1 Probable xyloglucan endotransglucosylase/hydrolase protein 19 | 1053 | 6e-114 |
| Q9FI31 Xyloglucan endotransglucosylase/hydrolase protein 20 | 1034 | 1e-111 |
| Q38857 Xyloglucan endotransglucosylase/hydrolase protein 22 | 880 | 7e-094 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A2RVL7 At1g65310 | 1066 | 3e-114 |
| Q06BI5 Xyloglucan endotransglucosylase/hydrolase 2 | 846 | 1e-088 |
| C6THE7 Putative uncharacterized protein | 836 | 1e-087 |
| Q84JB9 Putative xyloglucan endotransglycosylase | 836 | 1e-087 |
| Q84JX3 Putative xyloglucan endotransglycosylase | 831 | 5e-087 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G65310.1 XTH17 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1067 | 1e-116 |
| AT4G30280.1 XTH18 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1061 | 7e-116 |
| AT4G30290.1 XTH19 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1054 | 4e-115 |
| AT5G48070.1 XTH20 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1035 | 7e-113 |
| AT5G57560.1 TCH4 (Touch 4); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 880 | 7e-095 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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