Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN10856

FASTA Sequence
Unigene ID: UN10856Length: 820  SNP
CAATTAATAGAATAGATTATTTGTTATTACTTGAAAAAAACCTTACACAGACACCACGTAAACATAATATGAGCAACAAATGAATG
AAAATAATAGATAAAACTCATTCAAGTTACAAAGACAATGGCCAAGTAACTTATTTCAAGAACCAATAATTTAAGTGCACACTGCA
GGAACACCTTGAGGAAACCTTTTTTTATCGGTGCAATAGTTGTAGATCATGTACTTACTCTGTGCCCATTTCATTTTTTTCTGGCC
TTCCGGGTCAACTTTTTGAGTGAACCATGGGGCATTCCCGGGGCAAAATGATTTTCCGTTAGCCCAAACACATCCTTCCACATTGT
AGTTTCTGTAAAAGGCAGTGAAAGGAGCTTTTGACCAATCTGTTTTCTCCAATCCTCCCCTTGTGGCCCAATGCTCGGCTTCCCAA
AGGCTTGCGTAGAGCCTCATTGGCTGGTTCTTCGGGAATGGAACTCCCATTGACTCAGAGTTCTTGAACTCTCTAATAGGAATGCC
ATCAACTGTAAAAATAATCCTTTGGGGATTCCATGTGATACAGTAAGTGTGAAAGTTCTTTGTTGGGTCGAACCATAGATGAAACT
GCTGTTCTTTGTCTCCAGAGCCTCGTGTGTAAACATTAGTATGAAGAGTATACGGATGACCACTAATGTTTCCCAAGAACTCGAAA
TCGATCTCATCCCATGTAGTTCCGGGCGATTTAAGATAGAATGTTGTGACTGTACCAGCAGAGTTACCAGGGACAAGTTTCATTTG
AACCTCAGCTTTACATATAGAAACTCCTGATGGGACTGAACCCCGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002888396 ATXTH17 [Arabidopsis lyrata subsp. lyrata]10683e-114
NP_176710 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana]10664e-114
XP_002867356 ATXTH19 [Arabidopsis lyrata subsp. lyrata]10647e-114
XP_002867357 ATXTH18/XTH18 [Arabidopsis lyrata subsp. lyrata]10621e-113
NP_194757 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana]10602e-113

Swiss-Prot top hits (Blast detail)Scoree value
O80803 Probable xyloglucan endotransglucosylase/hydrolase protein 1710662e-115
Q9M0D2 Probable xyloglucan endotransglucosylase/hydrolase protein 1810601e-114
Q9M0D1 Probable xyloglucan endotransglucosylase/hydrolase protein 1910536e-114
Q9FI31 Xyloglucan endotransglucosylase/hydrolase protein 2010341e-111
Q38857 Xyloglucan endotransglucosylase/hydrolase protein 228807e-094

TrEMBL top hits (Blast detail)Scoree value
A2RVL7 At1g6531010663e-114
Q06BI5 Xyloglucan endotransglucosylase/hydrolase 28461e-088
C6THE7 Putative uncharacterized protein8361e-087
Q84JB9 Putative xyloglucan endotransglycosylase8361e-087
Q84JX3 Putative xyloglucan endotransglycosylase8315e-087

Arabidopsis top hits (Blast detail)Scoree value
AT1G65310.1 XTH17 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase10671e-116
AT4G30280.1 XTH18 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase10617e-116
AT4G30290.1 XTH19 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase10544e-115
AT5G48070.1 XTH20 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase10357e-113
AT5G57560.1 TCH4 (Touch 4); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase8807e-095

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
65  63%
 
93  38%

Unigene MembersMember information