RadishBase

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Information for unigene UN10858

FASTA Sequence

Unigene ID: UN10858	Length: 1328	SSR
GACAAAACAGATGAATTTTATATATAATAAGAATTTATAGGACCGAATCAAACAACCAATACGACTACAAAGACACAACAAAAAAG AAGAGTTTTCATAAAACGTGACTAGGTTGATTAGAGAGATCTCCAATTCTAAGAGAGTGGTCATCATCATCAACCTAGAAACAACC CTCTAGTTTCACTGACTCTCTTGATTGTTACACACGAAGACAAGATAACAGGAAAAGAGAACTGACTGAACTCTCTCTCTCTCTCT CTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTTAATCTGTGTGTGTGCATTTTTAGAGTAGGTCAAGATGCAAACGCATCAGAG ATAAAGAGATATTACTACAAGCTCTCTCTCGAACATCATCCATATAAGAATCCTGATCCTGAATCCAAGAAGCTCTTTGTCAAAAT CGCCACTGCTTATGAGATTTTGAAAGATAACGAGACTCGGGCACAATATGATTATGCAATTGAGCATCCAAGTGAGGTCAGTACAA CATTTAATTTCAAGTGTCAATCTCATTCTTGTTTTCTACATCTTTTAAAACAATTTCAACACCAGCCACACTGTGTTTTTCTTTTT GTTATTTACGTATTTTACAACACTGCTCAATACTACCGAGCCAAATATGGACACACGTCGGATCCCGTGCTGTTCTTGTTGGTCTA CTGGTAGTTTTGTCTGCGTTCCAATATATGAACAACGTAGCAAGGTATAATGAGGCGTTGGCTACAGTTAAGCGAACTCCTGCTTA CAAAAACAGGCTCAAGGCCTTAGAACTCGAACGCACTGGTGGAGTATCTAGCAAGAAGAAGGGTCCAAAGCAAATCGACCAGAAAC TTCAGCAAGAGCTAAGCAATGAACTCGACCTACAAATCAAAGGAGCTGAAAAACCGTCAGTCTGGGATCTTCTCGGTGTTCGATTC GTTCTCCTACCTTACACTATCATCAAGCCTCTAGTATGGTACAGCAGTTGGGTATGAAGATATAAGGTTAAGAAAGCTCCTTATTC ATGGGAAGGCGCATATTACCTAACCCAAAAATCACTTGGGGTGCCTCTGGACGCATGGACCAATCTCGATGCATATAAGAAGGAAG ATCTGGTACAGAGAAGGCTGTGGGAGAAGCAGAATCTTGAGAACTACTATGCAGAAATGCGTAAAGAATCGAAGCGGAGAAGATAG GTCCACTTGTCACTTACTATGCTAGGAGGGATACACATGAGAACTTAAGTTCCATAAACACTTTTGTTGCCATTATTACTTTTAAT GTTATTAAGATATCTGAACAAACAAACCGAGTTACACG

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_176370 DnaJ domain-containing protein [Arabidopsis thaliana]	822	2e-085
AAL86291 unknown protein [Arabidopsis thaliana]	822	2e-085
XP_002888071 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata]	818	5e-085
XP_002265115 PREDICTED: hypothetical protein [Vitis vinifera]	666	2e-067
XP_002305615 predicted protein [Populus trichocarpa]	666	2e-067

Swiss-Prot top hits (Blast detail)	Score	e value
Q9VXT2 DnaJ homolog subfamily C member 25 homolog	237	5e-019
B2GBQ6 Chaperone protein dnaJ	139	1e-007
Q8TQR1 Chaperone protein dnaJ	139	1e-007
Q5FVM7 DnaJ homolog subfamily C member 16	136	3e-007
Q9Y2G8 DnaJ homolog subfamily C member 16	134	5e-007

TrEMBL top hits (Blast detail)	Score	e value
Q8GUN6 Putative uncharacterized protein At1g61770	822	1e-085
Q8RXY7 Putative uncharacterized protein At1g61770 (Fragment)	822	1e-085
B9H1H4 Predicted protein	666	2e-067
Q9SYB3 Putative uncharacterized protein T13M11.13	658	1e-066
B9RXR8 Cysteine string protein, putative	644	5e-065

Arabidopsis top hits (Blast detail)	Score	e value
AT1G61770.1 DNAJ heat shock N-terminal domain-containing protein	823	5e-088
AT3G08970.1 ATERDJ3A; oxidoreductase	129	2e-007
AT4G21180.1 ATERDJ2B; heat shock protein binding / unfolded protein binding	127	3e-007
AT1G79940.1 ATERDJ2A; heat shock protein binding / unfolded protein binding	125	4e-007
AT1G79940.2 ATERDJ2A; heat shock protein binding / unfolded protein binding	125	4e-007

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


6	1			33%


7	2			67%

Unigene Members	Member information