Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN10860

FASTA Sequence
Unigene ID: UN10860Length: 1138 SSR 
CCAGATCTAATATTATTCTGAATTTTTTTTTAATTTTAGATGTAATCTGACAATACTTTTTGAGAGAAACAGAGAACACATGAAAA
CAGAGAGTAAAATAAAGTATATGTACACAATGCACTTCCGCATCTTTCTTCACCCAACAACAAAAAAAACATATGATGGTGTGTTC
GTTTTACAAAACTCCGATCTCAAGGGTTGAGATTTCTCCTCCCACAATCGCCGTAGATCTCTCATTACCCGCCAATTCAACTTCTT
TCCGACCAGATCTGTCCCCCTAGTGATTCCTGCTGTGTTTTCTTTTTCTTCTTTAATAAAGAGAAGAGCAAACCTAAAATCTGAAA
CCAGATCAGATCAGATCAATCACACTCGGCTCTCGACATAACCGAAAGCCTACTAGACGAGCTGAACGCAGCTCGTCTTGAGATGA
TGCGACGAAGGCCTATCAGAGTCGTCAACGATCTTCTCACCCACTCCCCTTCAACCCCACCGATTCTCACAAGCGAGTTCGTCATC
GCCGATCGCCGCATATTCAAACTGTTAGCCGTATACGACGCCGTACCTTGCCCGTGCGGATTCGCAACGTTCTTGTGGAGACTACA
CCGGAAAGATCCAGGATGCGTCGTCGGAGAACACATACACCTCCTCCTCGTCGCCGTCGCCGTCGTCTTCTCGGAGGCCTTAGGCT
GCGGTTTCTTGGAGACGGAGATGGATCGGTTGGGAGGAGAGTTGGATCTGCTGTCGAGAGAATAGCGAAACATAGGGTGGTGGGGA
GGAGTGTAGAGATTCACGCGAGGGGGAGAGGAGGATCGGTGGTGGTGGTTGCTGAAGAAGGATGAGGACGGGGAGGAGAAAGTAGA
GCTCGTGGAAGAAGCGAACGCTGCGGAGGAGGAAGAAGAAGACGACGGGACGGTTCTAGAGTAAGCGCCGCAGAATTGACCGGAGG
GTGATTGGGAACGAAGGACAGAGTTGTTTGACTTGGTACGAGATGAGGACGTGGTCACCATTGCTTTTCTAATGAGGACTCGAAGG
TCAAAAGAGAGAGACAGCAAGTCTCTGGTGGAGGAAGGAAGGAAGGAAGGAAGGAGGTTTTTGATTCTCTCTCTCTCTCCAGAGGC
CCCGGAGGGAGGTTGGTTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871454 hypothetical protein ARALYDRAFT_487941 [Arabidopsis lyrata subsp. lyrata]7361e-075
NP_196670 serine-rich protein-like protein [Arabidopsis thaliana]7243e-074
NP_197910 serine-rich protein-like protein [Arabidopsis thaliana]6492e-065
XP_002872151 hypothetical protein ARALYDRAFT_489379 [Arabidopsis lyrata subsp. lyrata]6438e-065
AAM67211 serine-rich protein [Arabidopsis thaliana]6411e-064

Swiss-Prot top hits (Blast detail)Scoree value
O94317 Uncharacterized serine-rich protein C215.131353e-007
Q17RH7 Putative protein TPRXL1335e-007
Q75JC9 Uncharacterized protein DDB_G02716701318e-007

TrEMBL top hits (Blast detail)Scoree value
Q9FY56 At5g110907242e-074
Q93WB2 AT5g25280/F18G18_206491e-065
Q8L8M8 Serine-rich protein6411e-064
A9PHV6 Predicted protein4984e-048
B9IL15 Predicted protein4903e-047

Arabidopsis top hits (Blast detail)Scoree value
AT5G11090.1 serine-rich protein-related7241e-076
AT5G25280.1 serine-rich protein-related6496e-068
AT5G25280.2 serine-rich protein-related6496e-068
AT5G20370.1 serine-rich protein-related2007e-016
AT5G55980.1 serine-rich protein-related1245e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  100%

Unigene MembersMember information