Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN10926

FASTA Sequence
Unigene ID: UN10926Length: 1983 SSR 
CTGTTAAAATAGACACGTCTTCTTCTTCTTCTTCGTCTTCACAATTATGGATCTCAGCCACTCTACTTCGGATTAATTAAGAAGAT
ATTTGTTTCCTGTTGTTGGGAGGAAGAAATTATTTTTGGATCTGAAACGAAAAATCAATCAAACAAACAAGGAAGGGGAAGATGGG
GTTCTTCAGCACAGTGCTAGGGTTTTGCGGATTTGGGATAGGGATATCCATGGGGCTCGTCATCGGATACTTCCTTTTCATCTACC
TCCAGCCCAACGACGTCAAGGATCCAAAAATTGAACCGATAGCAGAGCAAGATCCCAAATCCATGCTCCGTATGTTCCCTGAGATC
CCTCTCTGGGTCAAGAACCCCGACTTCGACCGTGTTGACTGGATCAACAAGTTCCTCGAGTACATGTGGCCTTACCTCGACAAAGC
AATCTGCAAAACCGCACGGAACATAGCCAAGCCCATCATCGAGGAGCAGATCCCCAAGTACAAGATCGACTCCGTCGATTTCGAAA
CCCTAACCCTCGGCTCTCTCCCTCCCACTCTCCAAGGGCATGAAAGTCTACCTCACTGACGAAAAGGAGCTGATCATGGAGCCTTG
CTTGAAATGGGCAGCTAATCCTAATGTCCTTGTCGCTATCAAAGCTTTCGGACTCGAGGTTACTGTTCAGGTGGTTGATCTTCAAG
TCTTTGCGCAGCCTCGTATCACTCTCAAACCTTTGGTCCCGAGCTTCCCTTGTTTCGCCAGTATTTATGTCTCTCTTATGGACAAG
CCACACGTTGATTTTGGGCTCAAGCTTGGTGGAGCTGATCTTATGTCTATCCCCGGCCTCTACAGATTTGTCCAGGAGCAAATCAA
GGATCAAGTTGCAAACATGTATCTCTGGCCTAAGACCCTTGTAGTTCCAATCCTTGACCCTGCCAAAGCGTTTAGAAGGCCGGTTG
GAATCGTCCATGTGAAGGTCGTGAGGGCTGTTGGGCTTAGGAAGAAAGATATGATGGGTGGGGCTGACCCCTACGTGAAGATCAAG
CTCTCTGAAGACAAGATTCCCTCTAAGAAGACCACCGTCAAACACAAGAATCTGAACCCTGAATGGAATGAGGAACATAAATTCTC
TGTCAGAGATCCCCAGACTCAGGTCCTAGAGTTCAGTGTCTATGACTGGGAACAGGTTGGGAAGCACGACAAGATGGGTATGAATG
TATTACCGCTGAAAGAAATGGTGCCTAACGAACACAAAAGCTTCACTTTGGAACTGCGCAAGACTCTGGAGGGTGCTGAAGAAGGA
GCGCAGCCTGACAAGGATAGAGGGAGGCTGGAGGTTGAGCTCTTGTATAAGCCATTCACAGAAGAAGAAATGCCAAAGGGCTTCGA
AGAATCGCAATCAGTGCAGAAGGCTCCTGAAGGCACACCGGCTGGTGGAGGAGTGCTTGCGGTGATAGTACATTCAGCTGAAGACG
TCGAAGGTAAGCACCATACCGACCCTTACGTCCGCATCTACTTCAAAGGAGAGGAGAGGAAAACCAAGCACGTCAAGAAGAACAGA
GACCCTAGGTGGGAGGAGGAGTTCACCTTCGTGCTCGAGGAGCCTCCAGTGCGCGAGAAGCTGCACGTGGAAGTACTCAGCACCTC
TCCAAGGATAGGTCTCTTGCATCCCAAGGAAACACTGGGGTACGTGGACATTCCGGTGGTGGACGTGGTGAACAACAAAAGGATGA
ACCAAAAGTTTCACCTTATCGATTCCAAGAACGGAAAGATCCAAATCGAGCTGGAGTGGCGAACCACCTCTTAGATTGCTGCTATT
CGAGAAGAGAGGAGAGAATTTGTTTGATGTTATAAACTCTTTGTGTTGTCGTTGTTGTTGTACAATATGGGCCTTTTAACTCTTAA
AACCAGACATCAGATTTGCAAAGCCCTTTTCTTATTTATATGTTTATGTCTGCTATTCGGTAGTGCGACTTTACTGCTCATTATTT
TCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565495 synaptotagmin A [Arabidopsis thaliana]20293e-225
XP_002272757 PREDICTED: hypothetical protein [Vitis vinifera]16432e-180
XP_002306182 plant synaptotagmin [Populus trichocarpa]16352e-179
CAN71066 hypothetical protein VITISV_031706 [Vitis vinifera]16163e-177
XP_002510559 calcium lipid binding protein, putative [Ricinus communis]16153e-177

Swiss-Prot top hits (Blast detail)Scoree value
O35681 Synaptotagmin-31751e-011
P40748 Synaptotagmin-31751e-011
P24507 Synaptotagmin-C1732e-011
P41823 Synaptotagmin-11732e-011
Q9BQG1 Synaptotagmin-31732e-011

TrEMBL top hits (Blast detail)Scoree value
Q9SKR2 Expressed protein20292e-225
B9H193 Plant synaptotagmin16351e-179
B9R8B6 Calcium lipid binding protein, putative16206e-178
A5CAU2 Putative uncharacterized protein16181e-177
B9GQS7 Predicted protein15964e-175

Arabidopsis top hits (Blast detail)Scoree value
AT2G20990.1 SYTA (SYNAPTOTAGMIN A)20309e-228
AT1G20080.1 SYTB14951e-165
AT5G04220.2 SYTC11543e-126
AT2G21010.1 C2 domain-containing protein11212e-122
AT5G04220.1 SYTC8041e-085

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
74  100%

Unigene MembersMember information