 |
Information for unigene UN10929
FASTA Sequence |
Unigene ID: UN10929 | Length: 891 |
SSR | | GGCTCTCTCTCTCTCTCTTTTCTCTTTTCTCTTTACTCTCCGCAGACATCAATTCTCCATTTCTCTTGACTAAAATTCTTCTGCGA
CCTGTGGCTTGTCTTTGATCCGTTCCCAGTGAATCTCCCTGCTTTTATCAGAAACATCACTCCCTTCTCCTCTCTCCTGTTTTTTG
TTCTTTCTTGCAAGAACTATATTTTGGTCTGATCAGATAAAAAAAATTATATTTCTTTATATCTGTGTTGGTGAGATGGGTTTGGA
CGATACCTATTCTGTCAAAGATAAAGTAAACTTGCAATCGAAGAAGCAATCTAACAAGAGTGATGAGAATCACAAAAAGAAGAAGA
AAAACAATGGCGTTAACAACAACAGTAAAGTCGACAAAGAAGAAGAAGAAGAAAGAGAAGCAAGTGGATGTTGGCTCAACTTTAGG
TTTATGTTTGGTTGTGTACCTTCAAAACCAGATGTTGATGCTTCCTCCTCTTCTCCTCTCTATGCCACTACCACCCCCACCGTGGA
AAGTAAACAGGCTAATGAGAAACCAACTGATCAACCAGTTTCCTCCACAACAACAACAACAACAACTAGCAATGCAGGAAGCTCTT
CTTCAACTCCAATGATCAGCGAAGAACTTAAGGTCTATTCTAACCTGACCAAGTTCACTTTCAACGATCTTAAGCTAGCCACCAGA
AATTTCAGACCCGAGAGTCTTCTTGGAGAAGGAGGTTTTGGTTGTGTCTTTAAAGGATGGATCCAAGAACACGGCACTGCTCCTGT
TAAACCCGGTGCTGGCCTCACCGTAGCTGTCAAAACCTTGAATCCTGATGGATTTCAAGGTCACAAAGAATGGCTTGCTGAGATCA
ATTTCCTTGGGAACCTTCTTCACCCTAATCT
|
|
|
GenBank top hits (Blast detail) | Score | e value |
NP_197012 protein kinase family protein [Arabidopsis thaliana] | 755 | 6e-078 |
XP_002871647 hypothetical protein ARALYDRAFT_909477 [Arabidopsis lyrata subsp. lyrata] | 755 | 6e-078 |
XP_002882187 hypothetical protein ARALYDRAFT_896131 [Arabidopsis lyrata subsp. lyrata] | 675 | 1e-068 |
NP_186779 protein kinase domain-containing protein [Arabidopsis thaliana] | 643 | 6e-065 |
AAM64595 putative protein kinase [Arabidopsis thaliana] | 635 | 5e-064 |
Swiss-Prot top hits (Blast detail) | Score | e value |
O49839 Protein kinase 2A, chloroplastic | 344 | 1e-031 |
P43293 Probable serine/threonine-protein kinase NAK | 335 | 1e-030 |
O48814 Serine/threonine-protein kinase BIK1 | 334 | 2e-030 |
O49840 Protein kinase 2B, chloroplastic | 328 | 8e-030 |
Q8H186 Probable receptor-like protein kinase At3g55450 | 324 | 2e-029 |
TrEMBL top hits (Blast detail) | Score | e value |
Q9LFP7 Serine/threonine specific protein kinase-like | 755 | 4e-078 |
Q9SRH7 At3g01300 | 643 | 4e-065 |
Q8LBS0 Putative uncharacterized protein | 635 | 3e-064 |
B9RUM3 Protein kinase APK1B, chloroplast, putative | 600 | 4e-060 |
B9IJS8 Predicted protein | 586 | 2e-058 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|