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Information for unigene UN10950
| FASTA Sequence |
| Unigene ID: UN10950 | Length: 865 |
SSR | | GGCTGCGCTCCTTGAAACATCCTTCTCCTTGTAACAAGAGATCAATTCCTTCTGAGAGAGAGAGATTCAAAAAACAATGGTGAAGA
TCTGTTGTATTGGAGCTGGATATGTTGGTGGTCCAACAATGGCAGTGATCGCACTCAAATGTCCACACATTGAAGTAGCAGTCGTT
GACATCTCTGTTCCACGTATCAACGCATGGAACAGTGACCAGCTTCCCATCTACGAGCCAGGTCTTGAAGACATCGTTAAGCAATG
TAGAGGGCAAAACCTCTTCTTCAGCACCGACGTTGAGAAACACGTGCGGGAAGCTGATATCGTCTTTGTCTCCGTCAACACCCCCA
CCAAAACCACTGGTCTCGGAGCTGGCAAAGCTGCGGATCTCACTTACTGGGAGAGTGCTGCTCGTATGATCGCCGATGTTTCGGCT
TCTGATAAGATCGTCGTTGAGAAATCCACTGTCCCTGTCAAAACGGCTGAAGCCATCGAGAAGATTCTGATGCATAACAGTAAAGG
GATCAAGTTCCAGATTTTGTCGAACCCGGAGTTTCTTGCGGAAGGTACTGCCATCGCTGATCTGTTCAACCCTGACCGTGTTCTCA
TTGGAGGACGAGAGACGCCTGAAGGTTTCAAAGCTGTTCAGACGCTCAAGGATATGCCTGCTTTTGTCTGAACGAGAACAAGGTAA
TAATAATGATAATCTGGCTCATTCTTTTTCCTTCTACCTTTGATTGTTTCTGTTTTTGCGTTTTGCGTCTTATAACGTCTACCTTT
GTTGTTTGTTTTCTTATATAAGCTCTCGTAATTCTTGTGTTTCAAATTTTGCCGAACAGACTACTACTTTGTATTCGATACATTTG
CATCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_198748 putative UDP-glucose 6-dehydrogenase 2 [Arabidopsis thaliana] | 967 | 1e-102 |
| XP_002870795 hypothetical protein ARALYDRAFT_916391 [Arabidopsis lyrata subsp. lyrata] | 957 | 2e-101 |
| XP_002877176 hypothetical protein ARALYDRAFT_905242 [Arabidopsis lyrata subsp. lyrata] | 952 | 8e-101 |
| AAM67208 UDP-glucose dehydrogenase, putative [Arabidopsis thaliana] | 946 | 4e-100 |
| NP_189582 putative UDP-glucose 6-dehydrogenase 1 [Arabidopsis thaliana] | 941 | 1e-099 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FM01 Probable UDP-glucose 6-dehydrogenase 2 | 967 | 6e-104 |
| Q9LIA8 Probable UDP-glucose 6-dehydrogenase 1 | 941 | 7e-101 |
| Q96558 UDP-glucose 6-dehydrogenase | 905 | 1e-096 |
| O02373 UDP-glucose 6-dehydrogenase | 674 | 6e-070 |
| O70199 UDP-glucose 6-dehydrogenase | 645 | 1e-066 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D2WK25 UDP-D-glucose dehydrogenase | 925 | 7e-098 |
| Q9LF33 At5g15490 | 921 | 2e-097 |
| Q6IVK6 Putative UDP-glucose dehydrogenase 2 | 913 | 2e-096 |
| Q6IVK7 Putative UDP-glucose dehydrogenase 1 | 913 | 2e-096 |
| B9REG0 UDP-glucose 6-dehydrogenase, putative | 909 | 5e-096 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G39320.1 UDP-glucose 6-dehydrogenase, putative | 967 | 6e-105 |
| AT3G29360.1 UDP-glucose 6-dehydrogenase, putative | 941 | 6e-102 |
| AT3G29360.2 UDP-glucose 6-dehydrogenase, putative | 941 | 6e-102 |
| AT5G15490.1 UDP-glucose 6-dehydrogenase, putative | 921 | 1e-099 |
| AT1G26570.1 UGD1 (UDP-GLUCOSE DEHYDROGENASE 1); NAD or NADH binding / UDP-glucose 6-dehydrogenase/ binding / catalytic/ coenzyme binding / oxidoreductase/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor | 873 | 5e-094 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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