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Information for unigene UN10956

FASTA Sequence
Unigene ID: UN10956Length: 965 SSR 
GGCTCGACGACAACCACAACCACCACCACATCAGGACACAAAAAGGGGTTTCTAATTCGGATCTGTACTTTCTCCATGGATGCTCG
TAAGAGAGGACGGCCTGAAGCTGCTGGTTCGTTCAACTCCAATGGCGGCGGCGGAGGATTCAAGAAGTCTAAGCAAGAGATGGAAT
CATATTCAACTGGTTTAGGAAGCAAATCCAAGCCTTGCACTAAATTTTTCAGCACTTCTGGCCGTCCTTTTGGAGATAACTGCCAC
TTTTTGCATTATGTTCCCGGAGGATACAATGCTGTAGCACAGCTGACGAACATGGCGCCCATGCCTCAAGCTTCCAGAAACATGCA
AGGATCTGGTGGTGGTGGTGGAGGAGGGAGATTCTCAGGGAGAGGAGGAGGAGAGTCTGGTCCTGGACACGTGTCTAGCTTTGGTG
CATCAGCCACTGCGAAGATCAGCGTGGATGCTTCGCTGGCCGGCGCCATCATTGGTAAAGGAGGAGTCAGTTCGAAACAGATATGT
CGTCAGACAGGGGCGAAGCTGTCGATTCAAGACCACGAGAGAGACCCTAACCTTAAGAACATTGAGCTCGAAGGGACGTTCGAGCA
GATAAACGAAGCTAGCGCGATGGTTAGGGAGCTGATCGGGAGGCTTAACTCTGCTGCTGGTAGGAGACCACCTGGTGCTGGTGGTG
GACTTGGAGGTGGGTGGGGGTTGGTTCAGAAAGGGAAACCGCATCCAGGAAGCAACTTCAAGACGAAGATGTGTGAGAGATTCGCG
AAAGGGAACTGTACGTTTGGTGATAGATGTCACTTTGCACACGGGGAAGCAGAGCTGCGCAGGTCAGGAATTGCCTAAGACAAGTC
GTTTTCTTTTGTGAACTCTAATATCAATCTTCATCTACTTTTATTTTATGTTTGTTTTAAAAAATACAATGTTAGTTTCATTGTCA
TTGTAAGTTTTCTTTCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34617 unnamed protein product [Thellungiella halophila]10854e-116
XP_002884884 KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]10836e-116
NP_566412 zinc finger CCCH domain-containing protein 36 [Arabidopsis thaliana]10674e-114
BAB01961 unnamed protein product [Arabidopsis thaliana]9733e-103
XP_002873278 KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]9188e-097

Swiss-Prot top hits (Blast detail)Scoree value
Q9C7C3 Zinc finger CCCH domain-containing protein 3610771e-116
Q9FG30 Zinc finger CCCH domain-containing protein 529094e-097
Q69XQ3 Zinc finger CCCH domain-containing protein 444533e-044
Q7XPK1 Zinc finger CCCH domain-containing protein 314481e-043
Q7F8R0 Zinc finger CCCH domain-containing protein 143119e-028

TrEMBL top hits (Blast detail)Scoree value
B4FB09 Putative uncharacterized protein4544e-043
B4FAX8 Putative uncharacterized protein4501e-042
B7F7Y2 Putative uncharacterized protein4482e-042
B8AVZ7 Putative uncharacterized protein4482e-042
Q01MN3 H1005F08.11 protein4482e-042

Arabidopsis top hits (Blast detail)Scoree value
AT3G12130.1 KH domain-containing protein / zinc finger (CCCH type) family protein10789e-118
AT5G06770.1 KH domain-containing protein / zinc finger (CCCH type) family protein9301e-100
AT1G32360.1 zinc finger (CCCH-type) family protein1325e-008
AT1G61080.1 proline-rich family protein1172e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  33%
 
92  67%

Unigene MembersMember information