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Information for unigene UN10960
| FASTA Sequence |
| Unigene ID: UN10960 | Length: 1671 |
SSR | | GGGCGAGAGGAAACGCGTCAGCATTGCGTTAGAGATCTTAACGCGGCCACAGATTCTCTTCCTTGACGAACCCACAAGCGGTTTGG
ACAGTGCTTCTGCTTTCTTTGTGATTCAAGCTCTTAGGAACATAGCTAGAGATGGCGGAAGAACCGTTGTTTCATCGATTCATCAG
CCTAGTAGCGAAGTTTTCGCTCTCTTCGACGATCTTTTCTTGCTCTCTAGTGGTGAGACTGTTTACTTTGGTGAATCCAAGTTTGC
TGTTGAGTTCTTTGCTGAAGCAGGGTTTCCTTGCCCGAAGAGGCGGAATCCTTCGGATCATTTCCTGAGATGTATAAACTCAGATT
TTGATGCCGTTACAGCTACACTTAAAGGATCTCAGAGGATGCGGGAGACACCAGCTACATCAGATCCTTTGATGAATCTAGCAACA
TCTGAGATCAAAGCTAGACTTGTTGAGAATTACCGTCGCTCAGTCTACGCTAAATCTGCTAAGTCTCGGATCCGTGAATTAGCTAG
CATTGAAGGACATCATGAGATGGAAGTAAGGAAGGGAAGCGAAGCGAGTTGGTTTAAACAGCTAAGGACGTTAACAAAGAGATCGT
TTGTGAACATGTGCCGCGATATTGGGTACTACTGGTCAAGAATTGTGATCTACATTGTCGTATCCATCTGTGTTGGAACCATCTTT
TACGATGTAGGGCACAGCTACACATCGATCTTGGCTCGGGTTTCTTGTGGTGGATTCATTACTGGTTTCATGACTTACATGTCCAT
TGGAGGGTTTCCTTCTTTCATTGAAGAGATGAAAGTGTTCTACAAAGAGAGACTGAGTGGTTACTACGGCGTTTCGGTTTATATTA
TATCGAACTACGTCTCTTCTTTCCCGTTCTTGGTCGCCATTTCGGGCATCACGGGGAGTATTACTTACACATGGTGAAGTTCCGTC
CAGGGTTCTCTCACTGGGCTTTCTTCTGTCTCACATATTCTTCTCTGTCTCGGTCATTGAGAGTCTCATGATGGTTGTTGCTTCTG
TCGTTCCAAACTTTTTGATGGGTCTCATTACCGGAGCTGGTATCATTGGAATCATCATGATGACTTCTGGATTCTTCCGTCTACTT
CCAGATCTTCCAAAGATTTTCTGGCGATACCCAATTTCTTTCATGAGTTATGGTTCTTGGGCTATTCAGGGTGCATACAAGAACGA
TTTTCTTGGACTAGAGTTTGAGCCTATGTTTGCGGGAGAACCCAAGATGACTGGAGAGGAAGTTATACAGAAAATATTTGGAGTTA
AAGTCACACATTCCAAGTGGTGGGACTTAGCAGCGATTGTGTTAATCCTTGTGTGTTACCGCATTCTCTTCTTCATAGTGTTGAAG
CTTAAGGAAAGAGCAGAGCCGGCTTTGAAGGCGTTACAAGCAAAGAGAACGATGAGGAGTCTCAACAAGAGACCTTCTTTTAGGAA
AGTCCCATCTCTATCTTCCTTATCTCCAAGGAGACACCAAGCTCTACATTCACTTTCTTCTCAAGAAGGTCTTACTTCTCCAATCC
ATTAAAGACTACATATATATATATCTATATATTTGTATACACTTTGTGGCTTCCATTTGCTTTGCACATACAATAGTTTCAACATT
ATCAATATGTATCAGCACCTGATGATTCTATTATCCA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_175561 ABC transporter G family member 12 [Arabidopsis thaliana] | 1536 | 4e-168 |
| XP_002894320 hypothetical protein ARALYDRAFT_892122 [Arabidopsis lyrata subsp. lyrata] | 1511 | 3e-165 |
| BAJ33599 unnamed protein product [Thellungiella halophila] | 1510 | 4e-165 |
| XP_002885419 abc transporter family protein [Arabidopsis lyrata subsp. lyrata] | 1412 | 9e-154 |
| BAB01452 ABC transporter-like protein [Arabidopsis thaliana] | 1409 | 2e-153 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C8K2 ABC transporter G family member 12 | 1536 | 2e-169 |
| Q8RWI9 ABC transporter G family member 15 | 1409 | 9e-155 |
| Q8RXN0 ABC transporter G family member 11 | 972 | 4e-104 |
| Q9C8J8 ABC transporter G family member 13 | 546 | 1e-054 |
| Q9ZUU9 ABC transporter G family member 3 | 455 | 4e-044 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HNY9 White-brown-complex ABC transporter family | 1289 | 1e-139 |
| B9GEU6 White-brown-complex ABC transporter family | 1283 | 6e-139 |
| B9RIF1 ATP-binding cassette transporter, putative | 1274 | 6e-138 |
| B6SP80 CER5 | 1121 | 4e-120 |
| C5YV41 Putative uncharacterized protein Sb09g007330 | 1118 | 8e-120 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G51500.1 CER5 (ECERIFERUM 5); ATPase, coupled to transmembrane movement of substances | 1536 | 1e-170 |
| AT3G21090.1 ABC transporter family protein | 1409 | 8e-156 |
| AT1G17840.1 WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11); ATPase, coupled to transmembrane movement of substances / fatty acid transporter | 972 | 4e-105 |
| AT1G51460.1 ABC transporter family protein | 546 | 9e-056 |
| AT2G28070.1 ABC transporter family protein | 530 | 6e-054 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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