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Information for unigene UN10964
FASTA Sequence |
Unigene ID: UN10964 | Length: 783 |
SSR | | GGATGCGCGGGCGGATACAGAGAGAGAGAGAGAGAGAGAGACAAACCCTTAGCTGAACGGTGCGAGATGGCGAGCTCAGTGACGCT
GCTTCTGTGTAGTCTTCTTCTTCTCGGAACCCTGAGCGCGATTCAGGTCAAGAAGTCGAAGGAGAACTTAAAGGAGATCACACACA
AGGTTTATTTCGATGTTGAGATTGATGGGAAAGAAGCTGGCCGTATTGTCATGGGTCTATATGGAAAGACAGTCCCTAAAACTGCA
GAGAATTTTCGAGCTTTGTGCACAGGGGAAAAGGGAATAGGTAAGAAAGGGAAGGCTCTACATTACAAGGGGAGCTCGTTCCACAG
GGTCATACCAAGCTTTATGCTCCAGGGAGGCGATTTCACCCAGGGCAATGGTATGGGAGGAGAGTCTATCTATGGTGAGACGTTTC
CTGATGAGAACTTCAAACTCAAGCATACTGGTCCAGGGCTTCTATCAATGGCAAACGCCGGCCAAGACACCAACGGTTCTCAGTTT
TTCATCACTACAGTGACAACAAGCTGGTTGGACGGGAGGCACGTAGTATTCGGGAAGGTAGTGTCGGGAATGGACGTGGTGTACAA
AATCGAAGCTGAGGGTAATCAGAGTGGAACTCCTAAGAGTAAAGTTGTGATTGTCGACAGTGGTGAGCTTCCTCTGTAACTCAACT
TTCATGTAGTTTTTCTCCATCTCATCAGTCATTGATGTGAGTTAAATCTAGTGCGTGAGACTTTTGTGTTTAAACGACTATCTTAG
CCACTTGAT
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GenBank top hits (Blast detail) | Score | e value |
XP_002864586 hypothetical protein ARALYDRAFT_495994 [Arabidopsis lyrata subsp. lyrata] | 999 | 2e-106 |
NP_200679 Peptidyl-prolyl cis-trans isomerase CYP20-1 [Arabidopsis thaliana] | 990 | 3e-105 |
ACU13170 unknown [Glycine max] | 941 | 1e-099 |
AEK80448 peptidyl-prolyl cis-trans isomerase [Carica papaya] | 896 | 2e-094 |
XP_002277763 PREDICTED: hypothetical protein [Vitis vinifera] | 890 | 1e-093 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9SP02 Peptidyl-prolyl cis-trans isomerase CYP20-1 | 990 | 1e-106 |
Q8LDP4 Peptidyl-prolyl cis-trans isomerase CYP19-4 | 869 | 1e-092 |
Q9TW32 Peptidyl-prolyl cis-trans isomerase B | 682 | 6e-071 |
P52015 Peptidyl-prolyl cis-trans isomerase 7 | 672 | 9e-070 |
P52011 Peptidyl-prolyl cis-trans isomerase 3 | 648 | 5e-067 |
TrEMBL top hits (Blast detail) | Score | e value |
C6SV97 Peptidyl-prolyl cis-trans isomerase | 941 | 9e-100 |
A5C2G6 Peptidyl-prolyl cis-trans isomerase | 889 | 9e-094 |
B9GIH7 Peptidyl-prolyl cis-trans isomerase | 888 | 1e-093 |
A9PAQ9 Peptidyl-prolyl cis-trans isomerase | 884 | 3e-093 |
B9SI28 Peptidyl-prolyl cis-trans isomerase | 884 | 3e-093 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G58710.1 ROC7; peptidyl-prolyl cis-trans isomerase | 991 | 8e-108 |
AT2G29960.1 CYP5 (CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase | 870 | 9e-094 |
AT3G55920.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 713 | 1e-075 |
AT4G38740.1 ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase | 632 | 4e-066 |
AT2G16600.1 ROC3; peptidyl-prolyl cis-trans isomerase | 631 | 5e-066 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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