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Information for unigene UN11001

FASTA Sequence
Unigene ID: UN11001Length: 1239 SSR 
GGATAATGGGGAAAACAAGCAAGTGGATTCGGAATTTCTTAACCGGAAAGAAAGAGAGAACAAAAGAAAAGATTAATCAGAGCGAG
TGTGGATTCACTTCTACTACTCCAGGCACTTCTAAAGAGAAACGTCGATGGAGTTTCAGACGTTCTTCTGCTACTGCACCACCAGC
TTGTGCTTCTACCCTCAAAGATTCATCTCCACCACCTCAACCGCCACCTCCTCCACCCCCACAACAACCATTTGTGGTGGATAGCG
AAGATGAGCAGAGCAAGAACGTTTCAGCCGTAGAGGTTGCAGTGGCTGTTGAAGAGTTTGCAGCAGTGAAGATCCAAGCTTGTTTT
CGTTCTCATTTGGCGAAAAAAGCATTAAGAGCGTTAAAAGGGTTGGTGAAACTACAAGCACTTGTGAGAGGTCATTTAGTAAGGAA
ACAAGCAACAGCTACACTTAGATGTATGCAAGCATTGATTACACTTCAAACTAAAGCTCGAGAACAGAGGATCCGTATGATCGAAG
ATTCGCCGATAAAACCCACAAATCCAAGAACATCGATTCATAAAACCCTGATTCATAACATTTACAACGAGAATGAAGAAAACATC
AAGATTGTGGAAATGGACACTCAGTCTAGATTTTACTCTCCAGCTCCTTCGGCTATAACAGACATGAGTCCTCGAGCGTATAGTAG
CCATTTCGAGGATTGTAACTCGTTCAACACAGCACAGAGCAGTCCTCAGTGTTCCAGATTCAAAGAGTCTTACAATGGAGATTCTT
TGTCTTCTTACGATTACCCTCTCTTCCCAAACTACATGGCCAATACTCAGTCTTCTAAAGCCAAGGCTCGGTCTCAGAGTGCGCCT
AAGCAGAGACCTCCTGAGATCTATGAGAAGCAGCCAAGCGGGAGGAGAAGATCTTCCATGGAAGCACCGAGGAACGGTGTCCCCAG
AGCTGTAAGGATGCAGAGATCTTCATCTCAGTTAGGCAAGGAAAGTCAAAGTCATCATCATCATCATCATCCGTGGATGGCAATTA
AGCTCGATAGATCTAACGTTTCTCTTATGGAGAGTGAATGTGGATCTACCAGTACTATTATGACCAATAGCAACTACGGTAGACAT
GTTGATGTGGGTTTGTGAAAAATTACTTGTTTCCCAAGAAATAATTACATGAGGTAAATCTTCATGTTTATTTTTTTTGTAAACTA
AAATCTTCATGTTTATTGCTCTCTTGTTCCTGGCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAL86322 unknown protein [Arabidopsis thaliana]15954e-175
NP_193211 protein IQ-domain 19 [Arabidopsis thaliana]15911e-174
XP_002870287 IQ-domain 19 [Arabidopsis lyrata subsp. lyrata]15641e-171
CAB10254 hypothetical protein [Arabidopsis thaliana]8472e-088
XP_002314666 predicted protein [Populus trichocarpa]4726e-045

Swiss-Prot top hits (Blast detail)Scoree value
Q8LPG9 Protein IQ-DOMAIN 141972e-014
Q8L4D8 Protein IQ-DOMAIN 311774e-012
Q9SF32 Protein IQ-DOMAIN 11622e-010
Q9FXI5 Protein IQ-DOMAIN 321514e-009

TrEMBL top hits (Blast detail)Scoree value
Q8RXR4 Putative uncharacterized protein At4g14750 (Fragment)15953e-175
O23331 Putative uncharacterized protein AT4g147508471e-088
B9HUR6 Predicted protein4724e-045
B9HK97 Predicted protein4142e-038
C6T8L1 Putative uncharacterized protein3911e-035

Arabidopsis top hits (Blast detail)Scoree value
AT4G14750.1 IQD19 (IQ-domain 19); calmodulin binding15914e-177
AT1G01110.2 IQD18 (IQ-domain 18)2511e-021
AT4G00820.1 iqd17 (IQ-domain 17); calmodulin binding2285e-019
AT2G26180.1 IQD6 (IQ-domain 6); calmodulin binding2222e-018
AT3G16490.1 IQD26 (IQ-domain 26); calmodulin binding2204e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  50%
 
61  50%

Unigene MembersMember information