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Information for unigene UN11002
| FASTA Sequence |
| Unigene ID: UN11002 | Length: 1218 |
SSR | | GGGAGGTTGCTTCTGGGATTCATCCGACTGAAAAGTGTGAAAGGAGGAAGAGATTCCAAAACCATGGCTGCTGATTCTACAACCGA
ACTCTGTTTGGTCTCTGTTGTCTTGCTCTTAGGCCTTGTCTCCTCGTCTCTCAACTTGCAGGGAGTTGCAGCAGAGTCTCTTAAAA
CAGAAACTGAACTCGAAGATACTCCAGGAAGAGATAGTGAAGAAGGTCAACGAACATCCAAACGCTGGATGGAAAGCTGCTATTAA
TGACCGTTTCTCTAACGCAACTGTAGCAGAGTTTAAGCGTCTCCTTGGTGTTAAACCAACACCTAAGAAGTTACTCTTAGGTGTTC
CTTTTGTAAGCCATGATCAATCTCTGAAGTTGCCTAAATCATTCGATGCTAGAACACATTGGCCTCAATGCACCAGTATTGGAAAC
ATCTTATATCAGGGACATTGTGGTTCTTGCTGGGCCTTTGGTGCTGTTGAATCACTATCTGATAGATTCTGTATCCAATTTGGAAT
GAACATTACTTTATCAGTAAATGATCTCTTAGCATACTGTGGATTCCGTTGTTGTGACGGTTGTGACGGTGGCTACCCAATTTCTG
CTTGGCAATACTTTTCCTACAGTGGTGTTGTCACTGAAGAGTGTGATCCATACTTTGATCAAACCGGATGCTCACACCCTGGCTGT
GAACCTGCATACAATACACCGCAATGCTTGAGGAAATGCGTTGGCAGAAACCAATTATGGAGCGAGTCAAAACATTACAGTGTTAA
TACATACGTTGTCGAGTCTAATCCTCAAGATATCATGGCTGAGATTTACAAGAATGGACCTGTCGAAGTCTCTTTCACAGTTTATG
AGGACTTTGCTCATTACAAATCTGGAGTGTACAAGCACATAACAGGTTCTAACATTGGAGGTCATGCTGTGAAACTTATTGGTTGG
GGAACCAAGAATGTGTTCAAGGTTACAACCGGTTCATATGAGATTTCTGTTGCGTCGGTTTAAGAAAAGAGATGGAGAAGTTTGTT
TCTGTAAGATATTCTATGTTACTGTGTTGTGGTTGTTGTTGTTGTTTCCGGGGACCGGAACTTGTTCGCCGTGAAAATGTTATAGA
CATTAAATAATTCAACCCAAGAAGAATTATAATATGGTTAATTTGCTTCTTTCTTAACTTTGTTTACACTTAGACTTGATCATTAA
AGAGTTAAATATTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAG69285 cathepsin B-like cysteine protease [Raphanus sativus] | 1409 | 1e-153 |
| NP_567215 cathepsin B [Arabidopsis thaliana] | 1315 | 1e-142 |
| BAJ34434 unnamed protein product [Thellungiella halophila] | 1313 | 2e-142 |
| XP_002874969 hypothetical protein ARALYDRAFT_490415 [Arabidopsis lyrata subsp. lyrata] | 1312 | 2e-142 |
| NP_849281 cathepsin B [Arabidopsis thaliana] | 1308 | 7e-142 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5R6D1 Cathepsin B | 579 | 1e-058 |
| P07858 Cathepsin B | 577 | 2e-058 |
| P43157 Cathepsin B-like cysteine proteinase | 546 | 7e-055 |
| P25792 Cathepsin B-like cysteine proteinase | 545 | 9e-055 |
| Q54QD9 Cathepsin B | 488 | 4e-048 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B5BQV5 Cathepsin B-like cysteine protease (Fragment) | 1409 | 9e-154 |
| Q94K85 Cathepsin B-like cysteine protease | 1315 | 7e-143 |
| Q9ZSI0 Cathepsin B-like cysteine protease | 1308 | 5e-142 |
| Q93VC9 At1g02300/T6A9_10 | 1185 | 9e-128 |
| B9GRU7 Predicted protein | 1109 | 6e-119 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G01610.1 cathepsin B-like cysteine protease, putative | 1315 | 4e-145 |
| AT4G01610.2 cathepsin B-like cysteine protease, putative | 1308 | 3e-144 |
| AT1G02305.1 cathepsin B-like cysteine protease, putative | 1185 | 5e-130 |
| AT1G02300.1 cathepsin B-like cysteine protease, putative | 768 | 1e-081 |
| AT3G45310.1 cysteine proteinase, putative | 170 | 2e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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