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Information for unigene UN11006
| FASTA Sequence |
| Unigene ID: UN11006 | Length: 724 |
SSR | | GGGGTCTCCGCCTCCTCTCTCTCTCTCTCTCTCTCTCTTTCTTCTTACGCAATTGCATAAAAATATGGCCACCGTTCAAGTTTCTT
CCACTGGCATGACCACCAAGGCTGTTCTTAGAAGCCAGCCAACCAACATTAAGCTCACCACTAACAGAGTCTCCGTTGGATCAGTT
CATAAAGTCTCGAGATCCTTCGGCTTGAAATGCTCAGCCAGCTCTGGTGGTGCCACCATGTCAGCAGTATACAAGGTCAAGCTCGT
CGGACCCGATGGCCAAGAAAACGAGTTTGAGGTCCCAGACGACCAGTACATATTGGATGCAGCTGAAGAAGCTGGAGTTGACTTGC
CTTACTCTTGCAGAGCCGGTGCCTGTTCCACCTGCGCCGGTAAGATCGAGAAAGGTGAAGTTGACCAGTCTGATGGTTCGTTTCTT
GAGGATCATCACTTTGAGAAAGGTTATGTCTTGACTTGTGTGGCTTACCCGCAGTCTGACCTTGTGATCCATACCCACAAAGAAGA
GGAACTCTTCTAAGCCTGGTCTCTCTCTATTTGGTGGTAATGATGCAAATTGTTGTTTTCGTGTTTTTATTATCAAGTTTTAAAGG
TATGCTTTTTGTATGAAAACGTCTCATGATATGCCTTTTTAGTGTTCATCAATCGTCACTGGATTGCAACTGGTTGATAATAAAAG
AGTTTAAGTAACCAATCTTTATGGTTTAAAAGAAAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_180320 ferredoxin 3 [Arabidopsis thaliana] | 637 | 2e-064 |
| XP_002880924 hypothetical protein ARALYDRAFT_901657 [Arabidopsis lyrata subsp. lyrata] | 619 | 2e-062 |
| P14936 RecName: Full=Ferredoxin, root R-B1 | 518 | 1e-050 |
| P14937 RecName: Full=Ferredoxin, root R-B2 | 463 | 3e-044 |
| XP_002523809 Ferredoxin-3, chloroplast precursor, putative [Ricinus communis] | 461 | 5e-044 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZQG8 Ferredoxin-3, chloroplastic | 637 | 9e-066 |
| P14936 Ferredoxin, root R-B1 | 518 | 6e-052 |
| P14937 Ferredoxin, root R-B2 | 463 | 1e-045 |
| P27788 Ferredoxin-3, chloroplastic | 420 | 1e-040 |
| P94044 Ferredoxin-6, chloroplastic | 399 | 3e-038 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SCU0 Ferredoxin-3, chloroplast, putative | 461 | 3e-044 |
| B9RPT1 Ferredoxin-3, chloroplast, putative | 458 | 7e-044 |
| C6T265 Putative uncharacterized protein | 458 | 7e-044 |
| C6SX14 Putative uncharacterized protein | 455 | 2e-043 |
| B7FH37 Putative uncharacterized protein | 454 | 2e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G27510.1 ATFD3 (ferredoxin 3); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | 638 | 6e-067 |
| AT1G10960.1 ATFD1 (FERREDOXIN 1); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | 376 | 2e-036 |
| AT1G60950.1 FED A; 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | 360 | 1e-034 |
| AT5G10000.1 ATFD4 (ferredoxin 4); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | 310 | 7e-029 |
| AT4G14890.1 ferredoxin family protein | 210 | 3e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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