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Information for unigene UN11036
| FASTA Sequence |
| Unigene ID: UN11036 | Length: 924 |
SSR | | GGATAGCAGTGAGGGAACGAGCATGGCAGCTTTATCATCATCCTCTCTGTTTTTCTCATCCAAAACAGCTATTCCGATCAATAATC
TAACCCTCATCCCGCCGTCTCTCCACCGCTTCTCTCTTCCCTCTTCATCATCTTCCTTTTCCTCTCTCTCTTCTTCTTCTTCTGCT
TCTCTCTTCACCACACACTCTCTGAAGAGTTCTCGAAGATCATCTCCTCAGGGATTCACCGTGAAGGCTGAGAAGAAGAATGTGCT
TATAGTCAACACCAACAGCGGCGGTCACGCCGTCATTGGCTTTTACTTTGCCAAAGAGCTTCTCTCCGCCGGCCACGCCGTCACCA
TCATGACTGTCGGAGAAGAATCTTCTGACAAGATGAAGAAACCTCCCTTCAGCCGTTTCTCCGAAATTGTAAGTGGGGGAGGAAAG
ACGGTGTGGGGAAACCCAGCCGATGTTGCGACTGTGGTCGGAGGTGAAACATTCGACGTTGTTCTTGACAACAATGGCAAGGACTT
GGATACCGTCAGGCCAGTGGTGGATTGGGCTAAAAGCTCAGGCGTGAAGCAGTTCTTGTTCATAAGCAGCGCAGGGATCTACAAGT
CCACCGAGGAACCTCCTTCAACATCTTCAACTGCCTTAGTGACAGAGCCGTTACTCTTGACGGTATGGCCAAGCTCTGTGCTGCTG
CTGCTGGCAAAACCGTTGAGATCGTGCATTACGACCCTAAAGCCATTGGGGTTGACGCCAAGAAGGCTTTTCCGTTCAGAAACATG
CATTTTTACGGGGAACCAAGAGCAGCAAAGGATAAATTAGGGTGGGAAAGTAAAACGAATTTCCCTGAAGATTTCAAGGAGAGATT
TGAAGAGTATGTTAAGATTGGCAGAGACAAGAAGGATATGAAGTTTGAATTAGATGACAAGATT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002878498 hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp. lyrata] | 874 | 1e-091 |
| NP_191873 chloroplast stem-loop binding protein-41 [Arabidopsis thaliana] | 864 | 1e-090 |
| XP_002275066 PREDICTED: hypothetical protein [Vitis vinifera] | 638 | 2e-064 |
| XP_002302114 predicted protein [Populus trichocarpa] | 636 | 4e-064 |
| ACU24035 unknown [Glycine max] | 633 | 8e-064 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LYA9 Uncharacterized protein At3g63140, chloroplastic | 864 | 6e-092 |
| Q9SA52 Uncharacterized protein At1g09340, chloroplastic | 190 | 9e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5AWW0 Putative uncharacterized protein | 638 | 2e-064 |
| B9GSN8 Predicted protein | 636 | 3e-064 |
| C6TM93 Putative uncharacterized protein | 633 | 6e-064 |
| C6TMG5 Putative uncharacterized protein | 627 | 3e-063 |
| Q7X998 MRNA-binding protein (Fragment) | 622 | 1e-062 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G63140.1 CSP41A (CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA); mRNA binding / poly(U) binding | 864 | 6e-093 |
| AT1G09340.1 CRB (CHLOROPLAST RNA BINDING); binding / catalytic/ coenzyme binding | 190 | 8e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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